BLASTX nr result

ID: Panax21_contig00036625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036625
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD52847.2|AF137288_1 putative translation initiation factor ...   252   7e-65
ref|XP_002272876.2| PREDICTED: translation initiation factor eIF...   252   1e-64
ref|XP_002513075.1| translation initiation factor eif-2b beta su...   250   3e-64
ref|XP_004143752.1| PREDICTED: translation initiation factor eIF...   247   3e-63
ref|XP_002297747.1| predicted protein [Populus trichocarpa] gi|2...   247   3e-63

>gb|AAD52847.2|AF137288_1 putative translation initiation factor 2B beta subunit [Nicotiana
           tabacum]
          Length = 415

 Score =  252 bits (644), Expect = 7e-65
 Identities = 143/245 (58%), Positives = 179/245 (73%), Gaps = 17/245 (6%)
 Frame = -3

Query: 824 MSDNQGIVNEFVAKLKKREVEGSQATARLTAELLRSVISLQRLPPINLAVALIEVVKSVG 645
           M D   +VN+F+ KLKKR++EGS+ATA+LTAE+LRS IS QRLP  N A ALI+ ++++G
Sbjct: 1   MPDMNTLVNDFIIKLKKRKIEGSKATAKLTAEVLRSCISQQRLPHTNQAAALIDAIRTIG 60

Query: 644 QKLIAANPVELAIGNIVRRVLHSIREEELLID-------DISTGSGDED--IQRDYKLVS 492
           +KLIAANPVELA+GNIVRRVLH IREE++ +         +  GS DED   Q D+  +S
Sbjct: 61  EKLIAANPVELAVGNIVRRVLHIIREEDVSLTAAAVGGLAVLAGSDDEDDFKQDDHPDLS 120

Query: 491 ----STAARNLLRPPSLHTLLESVPISAAACHTTGEYSDLKGKYKDA----RSQKLKHNI 336
               + A+R+ LRPPSL TLLE +P S AA HT+    D +GK K A     S+KLKHNI
Sbjct: 121 AAAVAAASRSTLRPPSLQTLLEDIPQSTAAPHTSSSGGDSEGKSKSADKNTASRKLKHNI 180

Query: 335 IQAVNELIAEIDFCHERIAEHAVEYIHHHEVILTLGRSRAVLKFLSAAKVKERSF*VLVA 156
           I+AVNELI +I  CHE+IAE AVE+IHH+EVILTLG SR V++FL AAK K+RSF V VA
Sbjct: 181 IEAVNELIQDIATCHEQIAEQAVEHIHHNEVILTLGNSRTVMEFLCAAKEKKRSFRVFVA 240

Query: 155 EGGPR 141
           EG PR
Sbjct: 241 EGAPR 245


>ref|XP_002272876.2| PREDICTED: translation initiation factor eIF-2B subunit beta-like
           isoform 1 [Vitis vinifera]
           gi|359487220|ref|XP_003633538.1| PREDICTED: translation
           initiation factor eIF-2B subunit beta-like isoform 2
           [Vitis vinifera] gi|297742689|emb|CBI35142.3| unnamed
           protein product [Vitis vinifera]
          Length = 417

 Score =  252 bits (643), Expect = 1e-64
 Identities = 156/291 (53%), Positives = 192/291 (65%), Gaps = 17/291 (5%)
 Frame = -3

Query: 824 MSDNQGIVNEFVAKLKKREVEGSQATARLTAELLRSVISLQRLPPINLAVALIEVVKSVG 645
           M D Q +VNEF+ KLKKR+VEGSQATAR+TAELLRSVIS QR+P  N A ALI+ +K+VG
Sbjct: 1   MPDVQVLVNEFIIKLKKRKVEGSQATARMTAELLRSVISQQRVPYNNQAGALIDAIKAVG 60

Query: 644 QKLIAANPVELAIGNIVRRVLHSIREEELLID-------DISTGSGDEDI--QRDYKLVS 492
           ++LIAANPVELA+GNIVRRVLH IREE+L +        ++S  S DED   + D+ ++S
Sbjct: 61  EQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAVAGLNLSAVSDDEDDGEREDHPVLS 120

Query: 491 STA----ARNLLRPPSLHTLLESVPISAAACHTTGEYSDLKGKYKDA----RSQKLKHNI 336
           + A    AR+ LRPPSL TLLE +P SAA   ++    D +GK K A    RS+KLKH+I
Sbjct: 121 AAAVAAAARSTLRPPSLQTLLEDMPDSAAVPQSSSSGGDSEGKSKSADKSSRSRKLKHDI 180

Query: 335 IQAVNELIAEIDFCHERIAEHAVEYIHHHEVILTLGRSRAVLKFLSAAKVKERSF*VLVA 156
           I+AVNELI +I  CHE+I+E AVE+IH +EVILTLGRSR V++FL AAK K+RSF V VA
Sbjct: 181 IEAVNELIQDIATCHEQISEQAVEHIHQNEVILTLGRSRTVMEFLCAAKEKKRSFRVFVA 240

Query: 155 EGGPRLDKDTFSALRQ*NKHIFYYVLIFIVINLNFTSLLIRYHGHVLAKEL 3
           EG PR                                    Y GHVLAKEL
Sbjct: 241 EGAPR------------------------------------YQGHVLAKEL 255


>ref|XP_002513075.1| translation initiation factor eif-2b beta subunit, putative
           [Ricinus communis] gi|223548086|gb|EEF49578.1|
           translation initiation factor eif-2b beta subunit,
           putative [Ricinus communis]
          Length = 442

 Score =  250 bits (639), Expect = 3e-64
 Identities = 144/245 (58%), Positives = 177/245 (72%), Gaps = 17/245 (6%)
 Frame = -3

Query: 824 MSDNQGIVNEFVAKLKKREVEGSQATARLTAELLRSVISLQRLPPINLAVALIEVVKSVG 645
           M D Q +VN+F+ KLKKR++EGSQATA+ TAE+LRSVIS QR+P  N A ALI+ VK+VG
Sbjct: 1   MPDVQALVNDFLNKLKKRKIEGSQATAKQTAEVLRSVISQQRVPYTNQAAALIDAVKAVG 60

Query: 644 QKLIAANPVELAIGNIVRRVLHSIREEELLIDD--------ISTGSGDEDIQRDYKLVSS 489
           ++LIAANPVELA+GNIVRRVLH IREE+L +           +    D+D +RD   V S
Sbjct: 61  EQLIAANPVELAVGNIVRRVLHIIREEDLSLTTAAIAGLNLAAVSDDDDDGERDDHPVLS 120

Query: 488 -----TAARNLLRPPSLHTLLESVPISAAACHTTGEYSDLKGKYKDA----RSQKLKHNI 336
                 AAR+ LRPPSL TLLE +P SAA  HT+    D +GK K A    RS+KLKH++
Sbjct: 121 AAAVAAAARSTLRPPSLQTLLEDMPDSAAIPHTSSSGGDSEGKSKSADKSSRSRKLKHDV 180

Query: 335 IQAVNELIAEIDFCHERIAEHAVEYIHHHEVILTLGRSRAVLKFLSAAKVKERSF*VLVA 156
           I++VNELI +I  CHE+IAE AVE+IH +EVILTLG SR VL+FL AAK K+RSF V VA
Sbjct: 181 IESVNELIQDIAMCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVA 240

Query: 155 EGGPR 141
           EG PR
Sbjct: 241 EGAPR 245


>ref|XP_004143752.1| PREDICTED: translation initiation factor eIF-2B subunit beta-like
           [Cucumis sativus]
          Length = 416

 Score =  247 bits (630), Expect = 3e-63
 Identities = 146/245 (59%), Positives = 176/245 (71%), Gaps = 17/245 (6%)
 Frame = -3

Query: 824 MSDNQGIVNEFVAKLKKREVEGSQATARLTAELLRSVISLQRLPPINLAVALIEVVKSVG 645
           M D Q IVN+FV KL KR++EGS ATA+ TAELLRSVIS QR+P  N A ALI+ VK+VG
Sbjct: 1   MPDVQAIVNDFVIKLMKRKIEGSLATAKHTAELLRSVISAQRIPYTNQAAALIDAVKAVG 60

Query: 644 QKLIAANPVELAIGNIVRRVLHSIREEELLID-------DISTGSGDE-DIQRDYKLVSS 489
           ++LIAANPVELA+GNIVRRVLH IREE+L +         +S  S DE DI++D + V S
Sbjct: 61  EQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDIEKDDRPVLS 120

Query: 488 -----TAARNLLRPPSLHTLLESVPISAAACHTTGEYSDLKGKYKDA----RSQKLKHNI 336
                 AAR+ LRPPSL TLLE VP   +   T+    D +GK K A    RS+KLKH++
Sbjct: 121 AAAVAAAARSTLRPPSLQTLLEDVPNQTSVHQTSSSGGDSEGKSKSADKSSRSRKLKHDV 180

Query: 335 IQAVNELIAEIDFCHERIAEHAVEYIHHHEVILTLGRSRAVLKFLSAAKVKERSF*VLVA 156
           I+AVNELI +I  CHE+IAE AVE+IH +EVILTLG SR VL+FL AAK K+RSF V VA
Sbjct: 181 IEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVA 240

Query: 155 EGGPR 141
           EG PR
Sbjct: 241 EGAPR 245


>ref|XP_002297747.1| predicted protein [Populus trichocarpa] gi|222845005|gb|EEE82552.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  247 bits (630), Expect = 3e-63
 Identities = 144/247 (58%), Positives = 176/247 (71%), Gaps = 19/247 (7%)
 Frame = -3

Query: 824 MSDNQGIVNEFVAKLKKREVEGSQATARLTAELLRSVISLQRLPPINLAVALIEVVKSVG 645
           M D Q +VN+F+ KLKKR++EGSQATAR TAELLRSVIS QR+P  N A ALI+ V++VG
Sbjct: 1   MPDVQALVNDFLIKLKKRKIEGSQATARHTAELLRSVISQQRVPYTNQAGALIDAVRAVG 60

Query: 644 QKLIAANPVELAIGNIVRRVLHSIREEELL----------IDDISTGSGDEDIQRDYKLV 495
           +KLIAANPVELA+GNIVRRVLH IREE+L           +   S G  D+D +RD   V
Sbjct: 61  EKLIAANPVELAVGNIVRRVLHIIREEDLSLTTAAIAGLNLSAASDGDDDDDGERDEHTV 120

Query: 494 SS-----TAARNLLRPPSLHTLLESVPISAAACHTTGEYSDLKGKYKDA----RSQKLKH 342
            S      AAR+ L PPSL TLLE +P SAA   T+    D +GK K A    R++KLKH
Sbjct: 121 LSAAVVAAAARSTLCPPSLQTLLEDMPESAAIPRTSSSGGDSEGKSKSADKSSRTRKLKH 180

Query: 341 NIIQAVNELIAEIDFCHERIAEHAVEYIHHHEVILTLGRSRAVLKFLSAAKVKERSF*VL 162
           ++I+AVNELI +I  CHE+IAE A+E+IH +EVILTLG S+ VL+FL AAK K+RSF V 
Sbjct: 181 DVIEAVNELIQDITTCHEQIAEQAIEHIHQNEVILTLGSSKTVLEFLYAAKEKKRSFRVF 240

Query: 161 VAEGGPR 141
           VAEG PR
Sbjct: 241 VAEGAPR 247


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