BLASTX nr result

ID: Panax21_contig00036618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036618
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329301.1| nbs-lrr resistance protein [Populus trichoca...   198   3e-49
ref|XP_002324939.1| nbs-lrr resistance protein [Populus trichoca...    88   8e-16
ref|XP_002458581.1| hypothetical protein SORBIDRAFT_03g036150 [S...    87   1e-15
ref|XP_002332511.1| nbs-lrr resistance protein [Populus trichoca...    87   1e-15
emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]    87   1e-15

>ref|XP_002329301.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870755|gb|EEF07886.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 908

 Score =  198 bits (504), Expect = 3e-49
 Identities = 95/156 (60%), Positives = 118/156 (75%)
 Frame = +3

Query: 3    NSLTIKCAWRKEIQIQASNPLENLEKLRIEGWIRNLLGWVCKLKSLKYLHLKDCMLTEDP 182
            +SLTIKCAWRKEIQIQ SNPLENLEKLR+ GWIR+LL W+ +L SLKYLHL DCML +DP
Sbjct: 722  SSLTIKCAWRKEIQIQISNPLENLEKLRVGGWIRDLLRWISRLSSLKYLHLWDCMLNQDP 781

Query: 183  ISSLQYLPSLTILTICNAYKGNNMCSDDAAGFPNLKELSLMNLAGLEEWTRIEEGCMRSL 362
            ISSLQ+LP+L +L++  A+KG  +  D+ AGFP LK LS+ +   L EWT+IEEG M  L
Sbjct: 782  ISSLQHLPNLVVLSLSKAFKGKQISCDNIAGFPKLKRLSIFHFEELTEWTKIEEGSMEKL 841

Query: 363  HTLIIAKCPQLKLPPKGLQNLTNLNMLLVKSMPAEF 470
              L I  C +LKLPP+GL++L +L  L + SM  EF
Sbjct: 842  QILTIGWCRKLKLPPRGLESLKDLETLQITSMYPEF 877


>ref|XP_002324939.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222866373|gb|EEF03504.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 916

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/139 (37%), Positives = 78/139 (56%)
 Frame = +3

Query: 54   SNPLENLEKLRIEGWIRNLLGWVCKLKSLKYLHLKDCMLTEDPISSLQYLPSLTILTICN 233
            S+P + L++L ++  +  L GW+  L+ +  L L+   L  DP+ +LQ LPSL +L +  
Sbjct: 744  SSPPKYLQRLYLKCSLPALPGWIASLQYISKLVLQYSNLKSDPLKALQKLPSLVLLELRQ 803

Query: 234  AYKGNNMCSDDAAGFPNLKELSLMNLAGLEEWTRIEEGCMRSLHTLIIAKCPQLKLPPKG 413
            AY G  +C  D +GFP LK+L L  L  L    RI +G M  L  L I  C  L+  P G
Sbjct: 804  AYAGEELCC-DPSGFPKLKKLGLHELERLRR-IRIAKGSMPGLERLDITACTVLETVPDG 861

Query: 414  LQNLTNLNMLLVKSMPAEF 470
            ++NL N+  L++  MP+ F
Sbjct: 862  IENLNNIEDLVLWHMPSTF 880


>ref|XP_002458581.1| hypothetical protein SORBIDRAFT_03g036150 [Sorghum bicolor]
            gi|241930556|gb|EES03701.1| hypothetical protein
            SORBIDRAFT_03g036150 [Sorghum bicolor]
          Length = 877

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 56/147 (38%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
 Frame = +3

Query: 33   KEIQIQASNPLENLEKLRIEGWIRNLLGWVCKLKSLKYLHLKDCMLTEDPISSLQYLPSL 212
            + + I    P   L+KL I G ++ L  W  +L  L  L L    L EDP+S L  LP+L
Sbjct: 707  RPLDIATLKPSSCLQKLHIAGPLQKLPVWFTQLDKLTKLRLSFSKLEEDPLSVLAQLPNL 766

Query: 213  TILTICNAYKGNNM-CSDDAAGFPNLKELSLMNLAGLEEWTRIEEGCMRSLHTLIIAKCP 389
              L +  AY+G  M C     GFPNLK   +  L  LEEW  ++EG M  +  + I  C 
Sbjct: 767  LFLQLNKAYQGKVMRCC--CPGFPNLKIFIITELEELEEWD-VDEGAMPCIQEVWIMSCE 823

Query: 390  QLKLPPKGLQNLTNLNMLLVKSMPAEF 470
             L   P GLQ+LT L  L +  MP+ F
Sbjct: 824  NLATVPTGLQSLTTLQRLRLVGMPSSF 850


>ref|XP_002332511.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222832617|gb|EEE71094.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 881

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/139 (37%), Positives = 76/139 (54%)
 Frame = +3

Query: 54   SNPLENLEKLRIEGWIRNLLGWVCKLKSLKYLHLKDCMLTEDPISSLQYLPSLTILTICN 233
            S+P + L++L ++  +  L GW+  L+ +  L L+   L  DP+  LQ LPSL +L +C 
Sbjct: 708  SSPPKYLQRLNLKCSLPALPGWIASLQYISKLVLQYSNLKSDPLKVLQKLPSLVMLELCQ 767

Query: 234  AYKGNNMCSDDAAGFPNLKELSLMNLAGLEEWTRIEEGCMRSLHTLIIAKCPQLKLPPKG 413
            AY G  +C  D +GF  LK L L  L  L    RI +G M  L  L I  C  L+  P G
Sbjct: 768  AYAGEELCC-DPSGFSKLKRLGLHELERLRR-IRIAKGSMPGLERLDITACTVLETVPDG 825

Query: 414  LQNLTNLNMLLVKSMPAEF 470
            ++NL N+  L++  MP+ F
Sbjct: 826  IENLKNIEDLVLWYMPSTF 844


>emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]
          Length = 653

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
 Frame = +3

Query: 72  LEKLRIEGWIRNLLGWVCKLKSLKYLHLKDCMLTEDPISSLQYLPSLTILTICNAYKGNN 251
           L KL++EG +  +  W+  ++ L YL L    L+E+P S LQ LP+L ILT+  A++  +
Sbjct: 479 LRKLQLEGVLERIPNWLGLMERLTYLRLGYSHLSENPTSVLQLLPNLKILTLWQAFEAKH 538

Query: 252 MCSD--DAAGFPNLKELSLMNLAGLEEWTRIEEGCMRSLHTLIIAKCPQLKLPPKGLQNL 425
           +  +   A GFP L++L++ +   LEEWT +EEG + SL  L +  C +L+  P+GLQ +
Sbjct: 539 IGKEFCRAGGFPKLEDLTIASHV-LEEWTELEEGAIPSLKFLXLRNCLRLRTLPEGLQFI 597

Query: 426 TNLNML 443
           T L  L
Sbjct: 598 TTLKQL 603


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