BLASTX nr result

ID: Panax21_contig00036528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036528
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_002529628.1| pentatricopeptide repeat-containing protein,...   158   4e-37
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ...   143   1e-32

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  186 bits (471), Expect = 2e-45
 Identities = 84/99 (84%), Positives = 91/99 (91%)
 Frame = -1

Query: 529 GCKIHGHTDLAEFAVKRLIDIDPNNGGYRIMLANVYSELGKWDEVRKVRKVLEEQNAHKT 350
           GCKIHGHTDLAEF++K+LID+DPNNGGY IMLAN+Y ELGKWDEVRKVRKVL+EQNAHKT
Sbjct: 475 GCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKT 534

Query: 349 PGCSWIEIDNQVHQFYSVDKTHPRNEDIYLTLECLFGPY 233
           PGCSWIEIDNQVHQFYSVDKTHPR E+IY TLE L   Y
Sbjct: 535 PGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLESLISLY 573


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  159 bits (401), Expect = 3e-37
 Identities = 68/97 (70%), Positives = 85/97 (87%)
 Frame = -1

Query: 529 GCKIHGHTDLAEFAVKRLIDIDPNNGGYRIMLANVYSELGKWDEVRKVRKVLEEQNAHKT 350
           GCK+HG TDLAEFA K+LI+IDP+NGGYRIMLANVY ELGKWDEVR V + L++Q ++K 
Sbjct: 417 GCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKV 476

Query: 349 PGCSWIEIDNQVHQFYSVDKTHPRNEDIYLTLECLFG 239
           PGCSWIE+D+QVHQFYS+DK++P+ ED+Y+ LE L G
Sbjct: 477 PGCSWIEVDDQVHQFYSLDKSNPKTEDLYIVLESLVG 513


>ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530913|gb|EEF32773.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = -1

Query: 529 GCKIHGHTDLAEFAVKRLIDIDPNNGGYRIMLANVYSELGKWDEVRKVRKVLEEQNAHKT 350
           GCK+HG+TDLAE A+K+LI+IDP NGGY IMLAN+Y  LGKWDEVRKVRK+L++ NA+KT
Sbjct: 301 GCKVHGNTDLAESAIKKLIEIDPKNGGYGIMLANLYGGLGKWDEVRKVRKMLKDHNAYKT 360

Query: 349 PGCSWIEIDNQVHQFYSVDKTHPRNEDIYLTLECL 245
           PGCSWIE+DN+V QFYSVDKTHPR+E+IY  LE L
Sbjct: 361 PGCSWIEVDNEVCQFYSVDKTHPRSEEIYRILENL 395


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  155 bits (393), Expect = 3e-36
 Identities = 67/94 (71%), Positives = 85/94 (90%)
 Frame = -1

Query: 526 CKIHGHTDLAEFAVKRLIDIDPNNGGYRIMLANVYSELGKWDEVRKVRKVLEEQNAHKTP 347
           CKIHG +DLAE++VK+LI++DP NGGYRIMLAN+Y+E GKWDEVRKVR++L+E+NA+KTP
Sbjct: 466 CKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTP 525

Query: 346 GCSWIEIDNQVHQFYSVDKTHPRNEDIYLTLECL 245
           GCSWIE+DNQV+QFYS D +HP  E+IY TLE +
Sbjct: 526 GCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLESM 559


>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
           gi|355494601|gb|AES75804.1| hypothetical protein
           MTR_6g059820 [Medicago truncatula]
          Length = 528

 Score =  143 bits (361), Expect = 1e-32
 Identities = 59/97 (60%), Positives = 82/97 (84%)
 Frame = -1

Query: 529 GCKIHGHTDLAEFAVKRLIDIDPNNGGYRIMLANVYSELGKWDEVRKVRKVLEEQNAHKT 350
           GCK+HG TDLAEFA K+L++IDP+NGGY  MLAN+Y +LGKWDE+R V   L++Q ++K 
Sbjct: 423 GCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKI 482

Query: 349 PGCSWIEIDNQVHQFYSVDKTHPRNEDIYLTLECLFG 239
           PGCSWIE+D++VHQF+S+D+++P+ E++Y  LE LFG
Sbjct: 483 PGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESLFG 519