BLASTX nr result

ID: Panax21_contig00036492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036492
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   211   1e-52
emb|CBI33681.3| unnamed protein product [Vitis vinifera]              211   1e-52
ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   211   1e-52
emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   211   1e-52
gb|AET37154.1| GRAS family transcription factor, partial [Quercu...   206   3e-51

>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/121 (83%), Positives = 111/121 (91%)
 Frame = -3

Query: 709 GVDGFDFVRGFQECLRWFRVYFESLDECFSKTNNERLMLERAAGRAVVDLVACQPLDSIE 530
           GVDGFDFV+GFQECLRWFRVY ESLDE F +T+NERLMLERAAGRA+VDLVAC P +SIE
Sbjct: 382 GVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIE 441

Query: 529 RREPATRWSRRLNAAGFSGVSFSDEVSDDVRALLRRYKEGWTMTQCSEAGIFLLWKDQPV 350
           RRE ATRWS+RL+A+GFS VSFSDEV DDVRALLRRYKEGW+MTQ S+AGIFL WKDQPV
Sbjct: 442 RRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPV 501

Query: 349 V 347
           V
Sbjct: 502 V 502


>emb|CBI33681.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/121 (83%), Positives = 111/121 (91%)
 Frame = -3

Query: 709 GVDGFDFVRGFQECLRWFRVYFESLDECFSKTNNERLMLERAAGRAVVDLVACQPLDSIE 530
           GVDGFDFV+GFQECLRWFRVY ESLDE F +T+NERLMLERAAGRA+VDLVAC P +SIE
Sbjct: 292 GVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIE 351

Query: 529 RREPATRWSRRLNAAGFSGVSFSDEVSDDVRALLRRYKEGWTMTQCSEAGIFLLWKDQPV 350
           RRE ATRWS+RL+A+GFS VSFSDEV DDVRALLRRYKEGW+MTQ S+AGIFL WKDQPV
Sbjct: 352 RRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPV 411

Query: 349 V 347
           V
Sbjct: 412 V 412


>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/121 (83%), Positives = 111/121 (91%)
 Frame = -3

Query: 709 GVDGFDFVRGFQECLRWFRVYFESLDECFSKTNNERLMLERAAGRAVVDLVACQPLDSIE 530
           GVDGFDFV+GFQECLRWFRVY ESLDE F +T+NERLMLERAAGRA+VDLVAC P +SIE
Sbjct: 367 GVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIE 426

Query: 529 RREPATRWSRRLNAAGFSGVSFSDEVSDDVRALLRRYKEGWTMTQCSEAGIFLLWKDQPV 350
           RRE ATRWS+RL+A+GFS VSFSDEV DDVRALLRRYKEGW+MTQ S+AGIFL WKDQPV
Sbjct: 427 RRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPV 486

Query: 349 V 347
           V
Sbjct: 487 V 487


>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/121 (83%), Positives = 111/121 (91%)
 Frame = -3

Query: 709 GVDGFDFVRGFQECLRWFRVYFESLDECFSKTNNERLMLERAAGRAVVDLVACQPLDSIE 530
           GVDGFDFV+GFQECLRWFRVY ESLDE F +T+NERLMLERAAGRA+VDLVAC P +SIE
Sbjct: 353 GVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIE 412

Query: 529 RREPATRWSRRLNAAGFSGVSFSDEVSDDVRALLRRYKEGWTMTQCSEAGIFLLWKDQPV 350
           RRE ATRWS+RL+A+GFS VSFSDEV DDVRALLRRYKEGW+MTQ S+AGIFL WKDQPV
Sbjct: 413 RRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPV 472

Query: 349 V 347
           V
Sbjct: 473 V 473


>gb|AET37154.1| GRAS family transcription factor, partial [Quercus suber]
          Length = 477

 Score =  206 bits (525), Expect = 3e-51
 Identities = 96/121 (79%), Positives = 110/121 (90%)
 Frame = -3

Query: 709 GVDGFDFVRGFQECLRWFRVYFESLDECFSKTNNERLMLERAAGRAVVDLVACQPLDSIE 530
           GVDG +FV+GFQECLRWFRVY E+L+E FSKT+NERLMLERAAGRA+VDLVAC P +SIE
Sbjct: 357 GVDGVEFVKGFQECLRWFRVYLEALEESFSKTSNERLMLERAAGRAIVDLVACAPSESIE 416

Query: 529 RREPATRWSRRLNAAGFSGVSFSDEVSDDVRALLRRYKEGWTMTQCSEAGIFLLWKDQPV 350
           RRE A RW+RRL+ +GFS +SFSDEV DDVRALLRRYKEGW+MTQCS+AGIFL WK+QPV
Sbjct: 417 RRESAARWARRLHVSGFSPISFSDEVCDDVRALLRRYKEGWSMTQCSDAGIFLAWKEQPV 476

Query: 349 V 347
           V
Sbjct: 477 V 477


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