BLASTX nr result

ID: Panax21_contig00036484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036484
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]    111   6e-23
ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus c...    97   2e-18
ref|XP_003524203.1| PREDICTED: protein SCAR3-like [Glycine max]        77   1e-12
ref|XP_002305068.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003532753.1| PREDICTED: protein SCAR3-like [Glycine max]        69   4e-10

>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score =  111 bits (278), Expect = 6e-23
 Identities = 76/179 (42%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
 Frame = -3

Query: 532  FWTNGGLLGLEPTKPPDFSVMNSVNHDSVAKSKEETDFCSDQSTFLEGDGNAAKTN-IVK 356
            FWTNGGLLGLEP+KPPDFSV N+VN DS          CS   T   GD  + K + +V+
Sbjct: 575  FWTNGGLLGLEPSKPPDFSVSNAVNPDS------RPSTCSVMQT---GDPRSGKLDRLVE 625

Query: 355  NSKLAKLDISSICSTSCHKDQEDXXXXXXXXXXXSQVHLNVKLEDSTDFHLSIGSNQSHK 176
            NS   + D++S CSTS   DQED           S   L+ K E  +D H S     +H+
Sbjct: 626  NSVCIEKDLASKCSTSRPGDQEDGVSIKRKSWGFSSAGLDTKPEKLSDSHQSARFGHAHE 685

Query: 175  LGFCETSSKIPGTEEPVNPD-TQATKSCKYDGKNSSWMFEFTNRLLVNGFQRKVSHVGD 2
             G        P TE PV PD T + ++ K + +NSS  F   + LL+NGFQR VS V D
Sbjct: 686  QGLNVAGPVTPRTELPVVPDETGSIETNKENNENSSRGFGLGHALLINGFQRNVSLVQD 744


>ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus communis]
            gi|223538272|gb|EEF39881.1| hypothetical protein
            RCOM_1015180 [Ricinus communis]
          Length = 1111

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
 Frame = -3

Query: 535  NFWTNGGLLGLEPTKPPDFSVMNSVNHDSVAKSKEETDFCSDQSTFLEGDGNAAKTNI-V 359
            +FWTNGGLLGLEP+KPPDF+V N+ N DS  +   E     +  +    DG   + +I V
Sbjct: 562  SFWTNGGLLGLEPSKPPDFAVANTSNMDSETRINSEVIGHPNHFSMPSNDGERGRPDILV 621

Query: 358  KNSKLAKLDISSICSTSCHKDQEDXXXXXXXXXXXSQVHLNVKLEDSTDFHLSIGSNQSH 179
            K+ +  + D++S  S+S HKDQ+                   ++E + DFH     N + 
Sbjct: 622  KDDRSTERDLTSERSSSQHKDQDS------------------EVEKTGDFHPVDRFNHAD 663

Query: 178  KLGFCETSSKIPGTEEPVNPDTQATKSCKYDGKNSSWMFEFTNRLLVNGFQRKVSHVGD 2
                  TS   PG E P++ + + T     + KNSS MF   +RLL+NGF+RK+S V D
Sbjct: 664  GERHNITSVVKPGNELPIDANIKDT-CIGENEKNSSQMFGLGHRLLINGFRRKISLVPD 721


>ref|XP_003524203.1| PREDICTED: protein SCAR3-like [Glycine max]
          Length = 1236

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
 Frame = -3

Query: 532  FWTNGGLLGLEPTKPPDFSVMNSVNHDSVAKSKEETDFCSDQSTFLEGDGNAAKTNIVKN 353
            FWTNGGLLGLEP+KPPDF+   S+   S++ +K ETD  S  ++  + +G   K     +
Sbjct: 686  FWTNGGLLGLEPSKPPDFNKSTSLGQGSLS-TKSETDGGSHHNSMQKSNG--YKEEWESS 742

Query: 352  SKLAK---LDISSICSTSCHKDQEDXXXXXXXXXXXSQVHLNVKLEDSTDFHLSIGSNQS 182
             ++A+    + +S   TS H D               Q  ++ K   ++      G  + 
Sbjct: 743  EEVAEQILKEPNSRFLTSGHNDD--------------QACVSEKATGNSQQSNGFGQTER 788

Query: 181  HKLGFCETSSKIPGTEEPVNPDTQ-ATKSCKYDGKNSSWMFEFTNRLLVNGFQRKVS 14
              LG  E     PG+  P  PDT+ +T+  + +G+NSS +F  + RLL+N FQRKVS
Sbjct: 789  DNLG--EIRVIAPGSILPSTPDTKDSTEPNQGNGENSSRVFGLSRRLLINSFQRKVS 843


>ref|XP_002305068.1| predicted protein [Populus trichocarpa] gi|222848032|gb|EEE85579.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/133 (35%), Positives = 69/133 (51%)
 Frame = -3

Query: 532 FWTNGGLLGLEPTKPPDFSVMNSVNHDSVAKSKEETDFCSDQSTFLEGDGNAAKTNIVKN 353
           FWTNGGLLGLEP+KPPDF+V N+ + DSV +SK+ET   ++ ++    DG      ++K+
Sbjct: 540 FWTNGGLLGLEPSKPPDFAVSNAKSPDSVTRSKDETGLPTNHTSMPINDG-GKPGRLIKD 598

Query: 352 SKLAKLDISSICSTSCHKDQEDXXXXXXXXXXXSQVHLNVKLEDSTDFHLSIGSNQSHKL 173
           +   +   +S  STS H DQ+                   K+E   DFH     +  ++ 
Sbjct: 599 AGSIESAPTSKGSTSWHDDQDS------------------KVEKPGDFHQGNRISHGYED 640

Query: 172 GFCETSSKIPGTE 134
           G   TS+  PG E
Sbjct: 641 GPNITSAVTPGNE 653


>ref|XP_003532753.1| PREDICTED: protein SCAR3-like [Glycine max]
          Length = 1115

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 10/183 (5%)
 Frame = -3

Query: 532  FWTNGGLLGLEPTKPPDFSVMNSVNHDSVAKSKEETDFCSDQSTFLEGDGNAAKTNIVKN 353
            FWTNGGLLGLEP+KPPDF+   S++  S++ +K ETD  S  ++  + +G   +    ++
Sbjct: 786  FWTNGGLLGLEPSKPPDFNKSTSLSQGSLS-TKSETDGGSHHNSMQKSNGYKEERESSED 844

Query: 352  -SKLAKLDISSICSTSCHKDQEDXXXXXXXXXXXSQVHLNVKLEDSTDFHLSIGSNQSHK 176
             ++    + SS   TS H D                        D          N    
Sbjct: 845  VAEQILKEPSSRFLTSGHND------------------------DQACISEKATGNSQQS 880

Query: 175  LGFCETSSKIPG-----TEEPVNPDTQATKSC----KYDGKNSSWMFEFTNRLLVNGFQR 23
             GFC+      G       E V P    TK      + +G+NSS +F  + RLL+N FQR
Sbjct: 881  NGFCQIERNSLGEIRVAAPESVLPSILDTKDITEPNQGNGENSSRVFGLSRRLLINSFQR 940

Query: 22   KVS 14
            KVS
Sbjct: 941  KVS 943


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