BLASTX nr result

ID: Panax21_contig00036477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036477
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   100   1e-19
ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g...    93   3e-17
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...    93   3e-17
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = -1

Query: 179 LFGAEILRVTTLLGSASVLDQSGLEHASPLASGGIYSNGGANVNRWTSPFQSEMSGL 9
           L   EILRVTTLLG+AS+LDQSGLEHASPLASGGI+SNGGANVN W SPFQSEMSGL
Sbjct: 62  LLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGGANVNGWASPFQSEMSGL 118


>ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g56140-like [Cucumis
           sativus] gi|449508337|ref|XP_004163285.1| PREDICTED: KH
           domain-containing protein At5g56140-like [Cucumis
           sativus]
          Length = 296

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/59 (79%), Positives = 51/59 (86%)
 Frame = -1

Query: 179 LFGAEILRVTTLLGSASVLDQSGLEHASPLASGGIYSNGGANVNRWTSPFQSEMSGLLQ 3
           L   EILRVTTLLG ASVL QSGLEHASPLASGGI+SNGGA+++ W S FQSEMSGLLQ
Sbjct: 68  LLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSEMSGLLQ 126


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = -1

Query: 179 LFGAEILRVTTLLGSASVLDQSGLEHASPLASGGIYSNGGANVNRWTSPFQSEMSGLLQ 3
           L   EILRVTTLLG+ASVL QSGLEHASPLASGG++SNGGA+ N W S FQSEMSGL+Q
Sbjct: 72  LLSQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADANGWASRFQSEMSGLIQ 130


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = -1

Query: 179 LFGAEILRVTTLLGSASVLDQSGLEHASPLASGGIYSNGGANVNRWTSPFQSEMSGLLQ 3
           L   EILRVTTLLG+ASVL QSGLEHASPLASGGI+SNG A+ N W S FQSEMSG+LQ
Sbjct: 74  LLNQEILRVTTLLGNASVLGQSGLEHASPLASGGIFSNGAADANGWASRFQSEMSGILQ 132


>ref|XP_002330577.1| predicted protein [Populus trichocarpa] gi|222872135|gb|EEF09266.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = -1

Query: 179 LFGAEILRVTTLLGSASVLDQSGLEHASPLASGGIYSNGGANVNRWTSPFQSEMSGLLQ 3
           L   EILRVTTLLG+ASVL QSGLEHASPL+SGGI+SNG A+ N W S FQSEMSG+LQ
Sbjct: 73  LLNQEILRVTTLLGNASVLGQSGLEHASPLSSGGIFSNGAADANGWASRFQSEMSGMLQ 131


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