BLASTX nr result

ID: Panax21_contig00036452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036452
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Viti...    87   1e-15
emb|CBI16271.3| unnamed protein product [Vitis vinifera]               86   4e-15
emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]    84   1e-14
ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glyc...    80   2e-13
ref|XP_002526352.1| conserved hypothetical protein [Ricinus comm...    78   6e-13

>ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Vitis vinifera]
          Length = 442

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 62/141 (43%), Positives = 75/141 (53%), Gaps = 17/141 (12%)
 Frame = -3

Query: 375 TQSPHNTSNINSQMQTVIEIPTEIVSEEEMALIEAAFAIATTR---------------SY 241
           TQ+    SN +S +  V +IP EIV++EEMALIEAA   A +                S 
Sbjct: 37  TQAEMTESNADSAIN-VPDIPVEIVTDEEMALIEAALTAARSSLSSSTIPAISFTAAASS 95

Query: 240 PSLSTQFQRNAXXXXXXXXXXXXXXS--TESRSVDDIEDFGGDFRKTQKRNRVNESLLHR 67
            S S    RNA              S  T++  + DIED  G  R TQK+  V ESLLHR
Sbjct: 96  SSFSPLLHRNARSIGSIARLSKRRLSDCTDTSPIRDIED-SGVLRSTQKKIGVRESLLHR 154

Query: 66  FRRKRGLFVTDITASEWCEKQ 4
           FRRK+GL VTDIT +EWCEKQ
Sbjct: 155 FRRKKGLSVTDITGTEWCEKQ 175


>emb|CBI16271.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = -3

Query: 354 SNINSQMQTVIEIPTEIVSEEEMALIEAAFAIA----TTRSYPSLSTQFQRNAXXXXXXX 187
           SN +S +  V +IP EIV++EEMALIEAA   A    ++ + P++S     ++       
Sbjct: 4   SNADSAIN-VPDIPVEIVTDEEMALIEAALTAARSSLSSSTIPAISFTAAASSSLSDC-- 60

Query: 186 XXXXXXXSTESRSVDDIEDFGGDFRKTQKRNRVNESLLHRFRRKRGLFVTDITASEWCEK 7
                   T++  + DIED  G  R TQK+  V ESLLHRFRRK+GL VTDIT +EWCEK
Sbjct: 61  --------TDTSPIRDIED-SGVLRSTQKKIGVRESLLHRFRRKKGLSVTDITGTEWCEK 111

Query: 6   Q 4
           Q
Sbjct: 112 Q 112


>emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]
          Length = 402

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 60/134 (44%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
 Frame = -3

Query: 354 SNINSQMQTVIEIPTEIVSEEEMALIEAAFAIATTR---------------SYPSLSTQF 220
           SN +S +  V +IP EIV++EEMALIEAA   A +                S  S S   
Sbjct: 4   SNADSAIN-VPBIPVEIVTDEEMALIEAALTAARSSLSSSTIPAXSFTAAASSSSFSPLL 62

Query: 219 QRNAXXXXXXXXXXXXXXS--TESRSVDDIEDFGGDFRKTQKRNRVNESLLHRFRRKRGL 46
            RNA              S  T++  + DIED  G  R TQK+  V ESLLHRFRRK+GL
Sbjct: 63  HRNARSIGSIARLSKRRLSXCTDTSPIRDIED-SGVLRSTQKKIGVRESLLHRFRRKKGL 121

Query: 45  FVTDITASEWCEKQ 4
            VTDIT +EWCEKQ
Sbjct: 122 SVTDITGTEWCEKQ 135


>ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glycine max]
          Length = 388

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/105 (41%), Positives = 65/105 (61%)
 Frame = -3

Query: 318 IPTEIVSEEEMALIEAAFAIATTRSYPSLSTQFQRNAXXXXXXXXXXXXXXSTESRSVDD 139
           IP EI+S++EMALIEAAFA A+TR++ SL +    ++               ++ +   D
Sbjct: 14  IPIEIISDDEMALIEAAFAFASTRTFSSLRSS---SSSKLPLCTNALSITPLSKRKLSSD 70

Query: 138 IEDFGGDFRKTQKRNRVNESLLHRFRRKRGLFVTDITASEWCEKQ 4
           IED        +K++ +++S LHRFR KRGL VTD+T++EWC KQ
Sbjct: 71  IEDLP----TCKKKHTLSDSFLHRFRNKRGLSVTDLTSTEWCPKQ 111


>ref|XP_002526352.1| conserved hypothetical protein [Ricinus communis]
           gi|223534311|gb|EEF36023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 54/135 (40%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
 Frame = -3

Query: 384 DSPTQSPHN-TSNINSQMQTVIEIPTEIVSEEEMALIEAAFAIA----TTRSYPSLSTQF 220
           +SP++  +N T+   S   ++  IP EIVSEEEM  IEAA A      ++ S P++ +  
Sbjct: 3   ESPSKLGNNVTTATMSSGNSISNIPIEIVSEEEMGFIEAALAATRPCFSSSSIPAICSP- 61

Query: 219 QRNAXXXXXXXXXXXXXXSTESRSV-DDIEDFGGDFRKTQ-KRNRV-NESLLHRFRRKRG 49
            R++               ++ R +  DIED G DF+ TQ K+NRV ++S L++FR++ G
Sbjct: 62  SRSSLFQNSVRSIQTITSFSKKRLIGSDIEDLG-DFKSTQLKKNRVADQSFLYKFRKRTG 120

Query: 48  LFVTDITASEWCEKQ 4
           L VTDIT++EWCEKQ
Sbjct: 121 LSVTDITSTEWCEKQ 135


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