BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036448
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305847.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquiti...    75   7e-12
ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana] gi|1222...    74   1e-11
ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impati...    73   3e-11
ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis...    73   3e-11

>ref|XP_002305847.1| predicted protein [Populus trichocarpa] gi|222848811|gb|EEE86358.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/117 (39%), Positives = 68/117 (58%)
 Frame = -2

Query: 503 VADHDLIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTI 324
           V+D+DLIY+G  L+D       +++E S+++M     +           +FVK WSGKTI
Sbjct: 189 VSDYDLIYQGKKLEDSNSLACCDLQEESILEMSPQTFQ-----------VFVKAWSGKTI 237

Query: 323 TLYVGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHV 153
           TL V + D V  VK KIF KLG P +    + F GK L+ + +LA Y I+K+ T+H+
Sbjct: 238 TLNVHQRDTVEDVKDKIFQKLGGP-SYCQSIVFSGKRLEANLDLAYYNIRKNATLHM 293


>ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
           guttata]
          Length = 534

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/115 (40%), Positives = 65/115 (56%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R F  YNI++ +V +  +  S  Q     W I  FVK  +GKTITL V 
Sbjct: 271 LIFAGKQLEDGRTFSDYNIQKVAVAETSVCLSGQQ-----WQI--FVKTLTGKTITLEVE 323

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 324 PSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 377



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 43  LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 94

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 95  PSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 170

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 171 PSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 348 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 399

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 400 PSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 453



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 424 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 475

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 476 PSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 529



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/73 (45%), Positives = 45/73 (61%)
 Frame = -2

Query: 362 ISIFVKPWSGKTITLYVGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATY 183
           + IFVK  +GKTITL V   D +  VK KI  K GIP  +   L F GK L+D + L+ Y
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDY 59

Query: 182 GIKKDNTIHVNCR 144
            I+K++T+H+  R
Sbjct: 60  NIQKESTLHLVLR 72


>ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
           gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName:
           Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
           gi|332195060|gb|AEE33181.1| polyubiquitin 12
           [Arabidopsis thaliana]
          Length = 230

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/117 (38%), Positives = 64/117 (54%)
 Frame = -2

Query: 494 HDLIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLY 315
           H LI+ G  L+D R    YN++E S + + +         F   + IFVK  +GKTITL 
Sbjct: 41  HRLIFAGKQLEDGRTLADYNVQEDSTLHLLLR--------FRGGMQIFVKTLTGKTITLE 92

Query: 314 VGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
           V   D +  +K KI  K GIP  +   L F GK L+D + LA Y I+K++T+H+  R
Sbjct: 93  VESSDTIDNLKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/115 (36%), Positives = 60/115 (52%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 170

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GI   +   L F GK  +D + LA Y I+K++T+H+  R
Sbjct: 171 SSDTIDNVKAKIQDKEGI-SPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLR 224



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -2

Query: 362 ISIFVKPWSGKTITLYVGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATY 183
           + IF+K  +GKT  L V   D +  VK KI    GIP  + H L F GK L+D + LA Y
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQ-HRLIFAGKQLEDGRTLADY 59

Query: 182 GIKKDNTIHVNCRF 141
            +++D+T+H+  RF
Sbjct: 60  NVQEDSTLHLLLRF 73


>ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
          Length = 471

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/145 (33%), Positives = 73/145 (50%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 322

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCRFTSC* 129
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R     
Sbjct: 323 ASDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGS 381

Query: 128 GKVLRMSLVYLCFARRISGTYVCYE 54
             VLR+      F + ++G  +  E
Sbjct: 382 HLVLRLRGGMQIFVKTLTGKTITLE 406



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKM--KMTASENQNTSFSWNISIFVKPWSGKTITLY 315
           LI+ G  L+D R    YNI++ S + +  ++    +        + IFVK  +GKTITL 
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGSHLVLRLRGGMQIFVKTLTGKTITLE 406

Query: 314 VGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
           V   D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 407 VEASDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 462



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 43  LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 94

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 95  ASDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 170

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 171 ASDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%)
 Frame = -2

Query: 488 LIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLYVG 309
           LI+ G  L+D R    YNI++ S + + +             + IFVK  +GKTITL V 
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR--------LRGGMQIFVKTLTGKTITLEVE 246

Query: 308 RYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
             D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 247 ASDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/73 (45%), Positives = 45/73 (61%)
 Frame = -2

Query: 362 ISIFVKPWSGKTITLYVGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATY 183
           + IFVK  +GKTITL V   D +  VK KI  K GIP  +   L F GK L+D + L+ Y
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDY 59

Query: 182 GIKKDNTIHVNCR 144
            I+K++T+H+  R
Sbjct: 60  NIQKESTLHLVLR 72


>ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
          Length = 237

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/117 (37%), Positives = 65/117 (55%)
 Frame = -2

Query: 494 HDLIYEGVTLQDWRIFGSYNIKETSVVKMKMTASENQNTSFSWNISIFVKPWSGKTITLY 315
           H +++ G  L+D R    YNI++ S + + +   EN        + IFVK  +GKTITL 
Sbjct: 68  HLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLREN--------MQIFVKTLTGKTITLE 119

Query: 314 VGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATYGIKKDNTIHVNCR 144
           V   D +  VK KI  K GIP  +   L F GK L+D + L+ Y I+K++T+H+  R
Sbjct: 120 VEPSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 175



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/70 (45%), Positives = 44/70 (62%)
 Frame = -2

Query: 362 ISIFVKPWSGKTITLYVGRYDRVRAVKTKIFGKLGIPCTEFHYLSFCGKALDDDKNLATY 183
           + IFVK  +GKTITL V   D +  VK KI  K GIP  +   L F GK L+D + L+ Y
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDY 59

Query: 182 GIKKDNTIHV 153
            I+K++T+H+
Sbjct: 60  NIQKESTLHL 69