BLASTX nr result

ID: Panax21_contig00036444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036444
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283702.1| PREDICTED: uncharacterized protein LOC100259...   271   2e-70
ref|XP_002306031.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|NP_001239718.1| uncharacterized protein LOC100818449 [Glycin...   240   4e-61
ref|XP_002324064.1| predicted protein [Populus trichocarpa] gi|2...   239   8e-61
ref|XP_002531853.1| 60S ribosomal protein L34, putative [Ricinus...   237   2e-60

>ref|XP_002283702.1| PREDICTED: uncharacterized protein LOC100259485 [Vitis vinifera]
          Length = 231

 Score =  271 bits (692), Expect = 2e-70
 Identities = 141/224 (62%), Positives = 166/224 (74%), Gaps = 4/224 (1%)
 Frame = -1

Query: 723 MVCFHSSISA----DQHTDMAKFVNSTDLYLKLKQSNQINRIKRTPNSTNQLNISACQPS 556
           MV FHSSIS     DQ   MA  +NS +   K +Q+N   R ++TPNS N   I  C  S
Sbjct: 1   MVYFHSSISVCNSVDQSGIMASSLNSGEACSKSRQNNHACRNRKTPNSPNSAKIPDCSRS 60

Query: 555 RSXXXXXXXXXXXVFACGFLLYPYIKLLSCKFMEIIGAIFLVLKEEVLNAPMIYGCLGLS 376
           RS           V ACGFLL+PY+K+++ +F++++GAI  + KEEV  APM+YG LG+S
Sbjct: 61  RSAMIDLVMLIAVVGACGFLLFPYVKVVANEFVKLVGAIIYLTKEEVSRAPMVYGSLGVS 120

Query: 375 IFFALIAMLAITVCMSSKCGKPGCRGLRKAAEFDIQLETKDCVKNSSTCLAKDGLKKGLF 196
           + FA IA+  I +C S KCGKP CRGLRKAAEFDIQLET++CVKNSS+ L KDGLKKGLF
Sbjct: 121 VLFAAIAVWGILICTSRKCGKPNCRGLRKAAEFDIQLETEECVKNSSS-LVKDGLKKGLF 179

Query: 195 ELPRDHHRELEAELKKMAPLNGRAVLVFRARCGCSVGRMEVPGP 64
           ELPRDHHRELEAELKKMAP NGRAVLVFRARCGCSVGRMEVPGP
Sbjct: 180 ELPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRMEVPGP 223


>ref|XP_002306031.1| predicted protein [Populus trichocarpa] gi|222848995|gb|EEE86542.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  241 bits (616), Expect = 1e-61
 Identities = 124/227 (54%), Positives = 157/227 (69%), Gaps = 7/227 (3%)
 Frame = -1

Query: 723 MVCFHSSISADQHTD------MAKFVNSTDLYLKLKQSNQ-INRIKRTPNSTNQLNISAC 565
           MV FHSSIS     D      MA  VNS++   K + +N  +++ ++T N +N   I  C
Sbjct: 1   MVYFHSSISVCNSFDQSSTASMANSVNSSEFNPKSRHNNNHVHKNRKTVNGSNCKTIPVC 60

Query: 564 QPSRSXXXXXXXXXXXVFACGFLLYPYIKLLSCKFMEIIGAIFLVLKEEVLNAPMIYGCL 385
             S+S           + ACGFLL+PYI++++  F+E + AI  V+KEEV+  P+IYG +
Sbjct: 61  DRSQSAVIDVVILIAVIGACGFLLFPYIRIVTLGFIEFVAAIHYVVKEEVMRNPVIYGSI 120

Query: 384 GLSIFFALIAMLAITVCMSSKCGKPGCRGLRKAAEFDIQLETKDCVKNSSTCLAKDGLKK 205
           G+S   A I    + +C + KCG P C+GLRKAAEFDIQLET++CVKNS+  L KDGLK+
Sbjct: 121 GISSLCAAIVAWIVILCAARKCGNPNCKGLRKAAEFDIQLETEECVKNSNGTLVKDGLKR 180

Query: 204 GLFELPRDHHRELEAELKKMAPLNGRAVLVFRARCGCSVGRMEVPGP 64
           GLFELP DHHRELEAELKKMAP NGRAVLVFRARCGCSVGR+EVPGP
Sbjct: 181 GLFELPHDHHRELEAELKKMAPTNGRAVLVFRARCGCSVGRLEVPGP 227


>ref|NP_001239718.1| uncharacterized protein LOC100818449 [Glycine max]
           gi|255642403|gb|ACU21465.1| unknown [Glycine max]
          Length = 243

 Score =  240 bits (612), Expect = 4e-61
 Identities = 131/233 (56%), Positives = 157/233 (67%), Gaps = 13/233 (5%)
 Frame = -1

Query: 723 MVCFHSSIS----ADQHTDMAKFVNSTDLYLKLKQSNQINRIKRTPNST---NQLNISAC 565
           MV FHSSIS     DQ + MA  + S D   K +Q N + + +RTP+S+   N L I  C
Sbjct: 1   MVYFHSSISLCKSVDQSSSMANSICSADFGSKSRQINHLQKNRRTPSSSSSSNSLQIPPC 60

Query: 564 QPSRSXXXXXXXXXXXVFACGFLLYPYIKLLSCKFMEIIGAIFLVLKEEVLNAPMIYGCL 385
             SRS           V ACGFL +PY++ L  K  E+I  +  ++KEEV  AP IY  +
Sbjct: 61  DRSRSAMVDVVMFIAVVCACGFLFFPYVEFLVTKCYEVIKVVVFLIKEEVSVAPWIYVSI 120

Query: 384 GLSIFFALIAMLAITVCMSSKCGKPGCRGLRKAAEFDIQLETKDCVKN---SSTCLAKD- 217
           GLS+ FA +A   +  C + KCG P C+GLRKAAEFDIQLET+DCVKN   SS+ +AKD 
Sbjct: 121 GLSVVFAALATWGVVACTTRKCGNPNCKGLRKAAEFDIQLETEDCVKNSASSSSNVAKDG 180

Query: 216 --GLKKGLFELPRDHHRELEAELKKMAPLNGRAVLVFRARCGCSVGRMEVPGP 64
             G+KKGLFELPRDHHRELEAELKKMAP NGRAVLV RARCGCSVGR+EVPGP
Sbjct: 181 AGGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLVLRARCGCSVGRLEVPGP 233


>ref|XP_002324064.1| predicted protein [Populus trichocarpa] gi|222867066|gb|EEF04197.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  239 bits (609), Expect = 8e-61
 Identities = 126/226 (55%), Positives = 157/226 (69%), Gaps = 7/226 (3%)
 Frame = -1

Query: 723 MVCFHSSISA----DQH--TDMAKFVNSTDLYLKLKQSNQ-INRIKRTPNSTNQLNISAC 565
           MV FHSSIS     DQ   T MA  VNS +   K + +N  +++ ++T N ++   I  C
Sbjct: 1   MVYFHSSISVCNSVDQSSTTSMANPVNSNEFNPKSRHNNNHVHKNRKTANGSSCKTIPVC 60

Query: 564 QPSRSXXXXXXXXXXXVFACGFLLYPYIKLLSCKFMEIIGAIFLVLKEEVLNAPMIYGCL 385
             SRS           + ACGFLL+PYIKL+    +E + AI  V+KEEV+  P+I+G +
Sbjct: 61  DRSRSAVIDVVILIAVIGACGFLLFPYIKLVILGLIEFVAAIHYVVKEEVMRNPLIFGSI 120

Query: 384 GLSIFFALIAMLAITVCMSSKCGKPGCRGLRKAAEFDIQLETKDCVKNSSTCLAKDGLKK 205
           G+S F A I    + +C + KCG P C+GLRKAAEFDIQLET++C+KNS+  L KDGLK+
Sbjct: 121 GISTFCAGIVAWIVILCTTRKCGNPNCKGLRKAAEFDIQLETEECMKNSNGTLVKDGLKR 180

Query: 204 GLFELPRDHHRELEAELKKMAPLNGRAVLVFRARCGCSVGRMEVPG 67
           GLFELPRDHHRELEAELKKMAP NGRAVLVFRARCGCSVGR+EVPG
Sbjct: 181 GLFELPRDHHRELEAELKKMAPANGRAVLVFRARCGCSVGRLEVPG 226


>ref|XP_002531853.1| 60S ribosomal protein L34, putative [Ricinus communis]
           gi|223528503|gb|EEF30531.1| 60S ribosomal protein L34,
           putative [Ricinus communis]
          Length = 235

 Score =  237 bits (605), Expect = 2e-60
 Identities = 125/226 (55%), Positives = 153/226 (67%), Gaps = 7/226 (3%)
 Frame = -1

Query: 723 MVCFHSSISADQHTD------MAKFVNSTDLYLKLKQSNQ-INRIKRTPNSTNQLNISAC 565
           MV FHSSIS     D      MA  VNS +L+ KLK  N   N  K   N  N  +I  C
Sbjct: 1   MVYFHSSISVCNSVDQSAATVMANSVNSNELHPKLKNKNHGQNGRKMNNNHVNCSSIPVC 60

Query: 564 QPSRSXXXXXXXXXXXVFACGFLLYPYIKLLSCKFMEIIGAIFLVLKEEVLNAPMIYGCL 385
             SRS           + ACGFLL+PYIK+++   ++ +  +  ++KEE+L +PMIY  +
Sbjct: 61  DRSRSAVVDVVILIAVIAACGFLLFPYIKVVTFCLIKFVTVMHSLVKEEILRSPMIYASI 120

Query: 384 GLSIFFALIAMLAITVCMSSKCGKPGCRGLRKAAEFDIQLETKDCVKNSSTCLAKDGLKK 205
           G+  F A IA+  +  C + KCG P C+GLRKAAEFDIQLET++CVKNS+  L KDG+K+
Sbjct: 121 GVGTFCAAIAVWIVFTCTTRKCGNPNCKGLRKAAEFDIQLETEECVKNSNGSLVKDGVKR 180

Query: 204 GLFELPRDHHRELEAELKKMAPLNGRAVLVFRARCGCSVGRMEVPG 67
           GLFELPRDHHRELEAELKKMAP NGRAVLVFRARCGCSVGR+EVPG
Sbjct: 181 GLFELPRDHHRELEAELKKMAPPNGRAVLVFRARCGCSVGRLEVPG 226


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