BLASTX nr result

ID: Panax21_contig00036427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036427
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   241   4e-62
ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|1...   236   2e-60
ref|XP_004149700.1| PREDICTED: sigma factor SigB regulation prot...   232   3e-59
ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59
gb|AFK41000.1| unknown [Medicago truncatula]                          227   7e-58

>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera] gi|147783136|emb|CAN70905.1| hypothetical
           protein VITISV_044176 [Vitis vinifera]
           gi|147795384|emb|CAN74235.1| hypothetical protein
           VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  241 bits (616), Expect = 4e-62
 Identities = 119/146 (81%), Positives = 128/146 (87%)
 Frame = -1

Query: 535 RYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 356
           RYLNDVDY+GGFEQEDLDQLFEAM SN+KAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR
Sbjct: 123 RYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 182

Query: 355 PDIALSVARIIFQSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMS 176
           PDIALSVA+ IFQ DLR +LCHVTVPCHI+QS+KDLAVPVVVSEYLHQNLGGESIVEVM+
Sbjct: 183 PDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEVMT 242

Query: 175 TDGHXXXXXXXXXXXXXXLRHIRYDI 98
           +DGH              LRHIRY+I
Sbjct: 243 SDGHLPQLSSPDIVVPVLLRHIRYNI 268


>ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|118489325|gb|ABK96467.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222840815|gb|EEE78362.1| predicted protein [Populus
           trichocarpa]
          Length = 270

 Score =  236 bits (602), Expect = 2e-60
 Identities = 117/147 (79%), Positives = 128/147 (87%)
 Frame = -1

Query: 535 RYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 356
           RYLNDVDY+GGFEQEDLDQLFEAMQ+N+KAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR
Sbjct: 123 RYLNDVDYYGGFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 182

Query: 355 PDIALSVARIIFQSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMS 176
           PDIALSVA+ IFQSD+R +L  VTVPCHI+QSMKDLAVPVV +EYLHQNLGGESIVEVMS
Sbjct: 183 PDIALSVAQTIFQSDMRSILHMVTVPCHILQSMKDLAVPVVAAEYLHQNLGGESIVEVMS 242

Query: 175 TDGHXXXXXXXXXXXXXXLRHIRYDIA 95
           +DGH              L+HIRY+IA
Sbjct: 243 SDGHLPQLSSPDIVIPVLLKHIRYNIA 269


>ref|XP_004149700.1| PREDICTED: sigma factor SigB regulation protein RsbQ-like [Cucumis
           sativus] gi|449522984|ref|XP_004168505.1| PREDICTED:
           sigma factor SigB regulation protein RsbQ-like [Cucumis
           sativus]
          Length = 270

 Score =  232 bits (591), Expect = 3e-59
 Identities = 114/147 (77%), Positives = 127/147 (86%)
 Frame = -1

Query: 535 RYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 356
           RYLND +YFGGFEQEDL+QLF+AMQSN+KAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR
Sbjct: 123 RYLNDENYFGGFEQEDLEQLFQAMQSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 182

Query: 355 PDIALSVARIIFQSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMS 176
           PDIALSVA+ IFQSD+R++L  VTVPCHIIQSMKD+AVPVVVSEYLH+NLGG SIVEVM 
Sbjct: 183 PDIALSVAQTIFQSDMRNILSFVTVPCHIIQSMKDMAVPVVVSEYLHRNLGGNSIVEVME 242

Query: 175 TDGHXXXXXXXXXXXXXXLRHIRYDIA 95
           +DGH              L+HI+YDIA
Sbjct: 243 SDGHLPQLSSPNTVIPVLLKHIKYDIA 269


>ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|222856742|gb|EEE94289.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  231 bits (589), Expect = 5e-59
 Identities = 114/147 (77%), Positives = 127/147 (86%)
 Frame = -1

Query: 535 RYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 356
           RYLNDVDY+GGFEQEDLDQLFEAMQ+N+KAWCSGFAPLAVGGDMDS+AVQEFSRTLFNMR
Sbjct: 123 RYLNDVDYYGGFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSIAVQEFSRTLFNMR 182

Query: 355 PDIALSVARIIFQSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMS 176
           PDIALSVA+ IF SD+R +L  VTVPCHI+QSMKDLAVPVV SE+LHQNLGGESIVEVMS
Sbjct: 183 PDIALSVAQTIFHSDMRAILHMVTVPCHILQSMKDLAVPVVASEHLHQNLGGESIVEVMS 242

Query: 175 TDGHXXXXXXXXXXXXXXLRHIRYDIA 95
           +DGH              L+HIR++IA
Sbjct: 243 SDGHLPQLSSPDIVIPVLLKHIRFNIA 269


>gb|AFK41000.1| unknown [Medicago truncatula]
          Length = 270

 Score =  227 bits (579), Expect = 7e-58
 Identities = 111/147 (75%), Positives = 126/147 (85%)
 Frame = -1

Query: 535 RYLNDVDYFGGFEQEDLDQLFEAMQSNFKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMR 356
           RYLND DYFGGFEQEDLDQLF+AM SN+K+WCSGFAP+AVGGDM+SVAVQEFSRTLFNMR
Sbjct: 123 RYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFNMR 182

Query: 355 PDIALSVARIIFQSDLRHLLCHVTVPCHIIQSMKDLAVPVVVSEYLHQNLGGESIVEVMS 176
           PDIALSV + IF+SD+R +LC VTVPCHIIQSMKDLAVPVVV+EYLHQ++G ESIVEVMS
Sbjct: 183 PDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEVMS 242

Query: 175 TDGHXXXXXXXXXXXXXXLRHIRYDIA 95
           T+GH              L+HIR+DIA
Sbjct: 243 TEGHLPQLSSPDVVVPVILKHIRHDIA 269


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