BLASTX nr result

ID: Panax21_contig00036420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036420
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76509.1| unknown [Picea sitchensis]                             194   1e-47
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...   191   1e-46
ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi...   189   4e-46
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2...   189   5e-46
ref|XP_001775099.1| predicted protein [Physcomitrella patens sub...   188   8e-46

>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score =  194 bits (494), Expect = 1e-47
 Identities = 94/186 (50%), Positives = 123/186 (66%)
 Frame = -3

Query: 701 LAKNISEKLVELEPTNAGNYVLLSNIYAAAGLWSEVRKLRTLAEEKGLRKPPGKSWISVR 522
           L K+ +E L +LEP NA  YVLLSNIYAAAG W +V K+R + +++G++K PG SWI V+
Sbjct: 61  LGKHAAECLFQLEPHNAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVK 120

Query: 521 SEIHYFTAGDRSHCQSDKIYXXXXXXXXXXXXSGYVPDLHWVXXXXXXXXXXXXXLSHSE 342
           +++H F   D+SH Q+++IY            +GYVPD ++V               HSE
Sbjct: 121 NKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNFVLHDVEMEQKEHSLYHHSE 180

Query: 341 KLAIAFGLINVSNGTPILINKNLRVCGDCHEFGKHVSKHVQREIILRDGSRFHHFTNGFC 162
           KLAIAFGLI+   G P+ I KNLRVCGDCH   K +SK V+REII+RD +RFHHF +G C
Sbjct: 181 KLAIAFGLISTLPGLPVRIIKNLRVCGDCHTATKFISKIVEREIIIRDANRFHHFKDGLC 240

Query: 161 SCKDYW 144
           SC DYW
Sbjct: 241 SCGDYW 246


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  191 bits (485), Expect = 1e-46
 Identities = 93/187 (49%), Positives = 119/187 (63%)
 Frame = -3

Query: 704  KLAKNISEKLVELEPTNAGNYVLLSNIYAAAGLWSEVRKLRTLAEEKGLRKPPGKSWISV 525
            ++ +  +E+ ++LEP NAG YV LS IYAAAG+W +V KLR L +E+G++K PG+SWI V
Sbjct: 634  EIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEV 693

Query: 524  RSEIHYFTAGDRSHCQSDKIYXXXXXXXXXXXXSGYVPDLHWVXXXXXXXXXXXXXLSHS 345
              E+H F AGD+SH ++++IY             GYVPD  +V               HS
Sbjct: 694  AGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHS 753

Query: 344  EKLAIAFGLINVSNGTPILINKNLRVCGDCHEFGKHVSKHVQREIILRDGSRFHHFTNGF 165
            EKLAIA+GLI+    TPI ++KNLRVC DCH   K +SK   REII RD  RFHHF NG 
Sbjct: 754  EKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGE 813

Query: 164  CSCKDYW 144
            CSC DYW
Sbjct: 814  CSCGDYW 820


>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  189 bits (481), Expect = 4e-46
 Identities = 93/187 (49%), Positives = 120/187 (64%)
 Frame = -3

Query: 704 KLAKNISEKLVELEPTNAGNYVLLSNIYAAAGLWSEVRKLRTLAEEKGLRKPPGKSWISV 525
           +LA+  +  L+EL+P N G+YVLLSNIYA AG W +V K R +  ++ L+K PG +WI V
Sbjct: 387 ELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEV 446

Query: 524 RSEIHYFTAGDRSHCQSDKIYXXXXXXXXXXXXSGYVPDLHWVXXXXXXXXXXXXXLSHS 345
            ++ + F+ GDRSH QS +IY            +GYVPD  +V              +HS
Sbjct: 447 DNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHS 506

Query: 344 EKLAIAFGLINVSNGTPILINKNLRVCGDCHEFGKHVSKHVQREIILRDGSRFHHFTNGF 165
           EKLAIAFGLI +  G PI I+KNLRVCGDCH F K VS  ++R II+RD +RFHHF +G 
Sbjct: 507 EKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGT 566

Query: 164 CSCKDYW 144
           CSC DYW
Sbjct: 567 CSCGDYW 573


>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
            predicted protein [Populus trichocarpa]
          Length = 682

 Score =  189 bits (480), Expect = 5e-46
 Identities = 93/189 (49%), Positives = 120/189 (63%)
 Frame = -3

Query: 710  ETKLAKNISEKLVELEPTNAGNYVLLSNIYAAAGLWSEVRKLRTLAEEKGLRKPPGKSWI 531
            +T+L + + +KL+ LEP ++GNYVLLSNIYAA+  W E  K+R++  E+G++K PG SWI
Sbjct: 494  DTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWI 553

Query: 530  SVRSEIHYFTAGDRSHCQSDKIYXXXXXXXXXXXXSGYVPDLHWVXXXXXXXXXXXXXLS 351
             V   +H F  GD SH  S+KIY            +GYVP    V               
Sbjct: 554  EVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGC 613

Query: 350  HSEKLAIAFGLINVSNGTPILINKNLRVCGDCHEFGKHVSKHVQREIILRDGSRFHHFTN 171
            HSEKLA+AFGLI+ +    IL+ KNLRVCGDCHE  KH+S+   REII+RD +RFH FT+
Sbjct: 614  HSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTD 673

Query: 170  GFCSCKDYW 144
            G CSCKDYW
Sbjct: 674  GLCSCKDYW 682


>ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162673550|gb|EDQ60071.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  188 bits (478), Expect = 8e-46
 Identities = 92/187 (49%), Positives = 117/187 (62%)
 Frame = -3

Query: 704  KLAKNISEKLVELEPTNAGNYVLLSNIYAAAGLWSEVRKLRTLAEEKGLRKPPGKSWISV 525
            ++ +  +E  ++LEP NAG YV LS IYAAAG+W +V KLR   +E+G++K PG+SWI +
Sbjct: 618  EIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEI 677

Query: 524  RSEIHYFTAGDRSHCQSDKIYXXXXXXXXXXXXSGYVPDLHWVXXXXXXXXXXXXXLSHS 345
              E+H F A D+SH ++ +IY             GYVPD  +V               HS
Sbjct: 678  AGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHS 737

Query: 344  EKLAIAFGLINVSNGTPILINKNLRVCGDCHEFGKHVSKHVQREIILRDGSRFHHFTNGF 165
            EKLAIA+GLI+   GTPI I+KNLRVC DCH   K +SK  +REII RD  RFHHF NG 
Sbjct: 738  EKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGE 797

Query: 164  CSCKDYW 144
            CSC DYW
Sbjct: 798  CSCGDYW 804


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