BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036406
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g...   156   2e-36
ref|XP_003578512.1| PREDICTED: transcription initiation factor I...   154   6e-36
ref|XP_003553400.1| PREDICTED: transcription initiation factor I...   154   6e-36
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   154   7e-36
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   153   1e-35

>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
           gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|18481632|gb|AAL73491.1|AF464908_1 general
           transcription factor TFIIB [Oryza sativa]
           gi|50725809|dbj|BAD33339.1| Transcription initiation
           factor IIB [Oryza sativa Japonica Group]
           gi|50726577|dbj|BAD34211.1| Transcription initiation
           factor IIB [Oryza sativa Japonica Group]
           gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
           Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
           protein OsI_32170 [Oryza sativa Indica Group]
           gi|125606444|gb|EAZ45480.1| hypothetical protein
           OsJ_30135 [Oryza sativa Japonica Group]
           gi|347737122|gb|AEP20532.1| transcription factor [Oryza
           sativa Japonica Group]
          Length = 312

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/86 (89%), Positives = 84/86 (97%)
 Frame = -2

Query: 467 VKAAQEAVQGSEDLDIRRSPISVAAAVIYMITQLADDKKPLKDISIATGVAEGTIRNSYK 288
           VKAAQEAVQ SE+LDIRRSPIS+AAAVIYMITQL+DDKKPLKDIS+ATGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYK 286

Query: 287 DLYPYASRMIPSWYAKEEDLKNLCSP 210
           DLYPYASR+IP+ YAKEEDLKNLC+P
Sbjct: 287 DLYPYASRLIPNTYAKEEDLKNLCTP 312


>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB-like [Brachypodium
           distachyon]
          Length = 312

 Score =  154 bits (390), Expect = 6e-36
 Identities = 76/86 (88%), Positives = 84/86 (97%)
 Frame = -2

Query: 467 VKAAQEAVQGSEDLDIRRSPISVAAAVIYMITQLADDKKPLKDISIATGVAEGTIRNSYK 288
           VKAAQEAVQ SE+LDIRRSPIS+AAAVIYMITQL++DKKPLKDIS+ATGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYK 286

Query: 287 DLYPYASRMIPSWYAKEEDLKNLCSP 210
           DLYPYASR+IP+ YAKEEDLKNLC+P
Sbjct: 287 DLYPYASRLIPNTYAKEEDLKNLCTP 312


>ref|XP_003553400.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 296

 Score =  154 bits (390), Expect = 6e-36
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = -2

Query: 467 VKAAQEAVQGSEDLDIRRSPISVAAAVIYMITQLADDKKPLKDISIATGVAEGTIRNSYK 288
           VKAAQEAVQ SE+ DIRRSPIS+AAAVIY+ITQL+DDKKPLKDIS+ATGVAEGTIRNSYK
Sbjct: 211 VKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYK 270

Query: 287 DLYPYASRMIPSWYAKEEDLKNLCSP 210
           DLYP+ S++IPSWYAKE+DLKNLCSP
Sbjct: 271 DLYPHVSKIIPSWYAKEDDLKNLCSP 296


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = -2

Query: 467 VKAAQEAVQGSEDLDIRRSPISVAAAVIYMITQLADDKKPLKDISIATGVAEGTIRNSYK 288
           VKAAQEAVQ SE+ DIRRSPIS+AAAVIY+ITQL+DDKKPLKDIS+ATGVAEGTIRNSYK
Sbjct: 228 VKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYK 287

Query: 287 DLYPYASRMIPSWYAKEEDLKNLCSP 210
           DLYP+ S++IP+WYAKEEDLKNLCSP
Sbjct: 288 DLYPHVSKIIPNWYAKEEDLKNLCSP 313


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/86 (84%), Positives = 82/86 (95%)
 Frame = -2

Query: 467 VKAAQEAVQGSEDLDIRRSPISVAAAVIYMITQLADDKKPLKDISIATGVAEGTIRNSYK 288
           VKAAQEAVQ SE+ DIRRSPIS+AAAVIY+ITQL+DDKKPLKDIS+ATGVAEGTIRNSYK
Sbjct: 227 VKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYK 286

Query: 287 DLYPYASRMIPSWYAKEEDLKNLCSP 210
           DLYP+ S+++P WYAKEEDLKNLCSP
Sbjct: 287 DLYPHVSKILPGWYAKEEDLKNLCSP 312