BLASTX nr result

ID: Panax21_contig00036384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036384
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...   276   1e-72
emb|CBI26414.3| unnamed protein product [Vitis vinifera]              276   2e-72
ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   276   2e-72
ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|2...   271   4e-71
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   271   5e-71

>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
            gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
            putative [Ricinus communis]
          Length = 989

 Score =  276 bits (706), Expect = 1e-72
 Identities = 137/154 (88%), Positives = 146/154 (94%)
 Frame = -3

Query: 497  SFYNEGEADIVVQHVFSLLYAGVSPSAIAVQSPYVAQVQLLRDRLDELPGARGIDVATID 318
            SFYNEGEA+IVVQHV SL+YAGV P+ IAVQSPYVAQVQLLRDRLDELP A G++VATID
Sbjct: 836  SFYNEGEAEIVVQHVISLIYAGVRPTTIAVQSPYVAQVQLLRDRLDELPEADGVEVATID 895

Query: 317  SFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 138
            SFQGREADAVIISMVRSN +GAVGFLGDSRRMNVAITRAR+HVAVVCDSSTICHNTFLAR
Sbjct: 896  SFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARRHVAVVCDSSTICHNTFLAR 955

Query: 137  LLRHIRYFGRVKHTETGSFGGSGLGMNPMLPSVS 36
            LLRHIRYFGRVKH E GSFGGSGLGM+PMLPS+S
Sbjct: 956  LLRHIRYFGRVKHAEPGSFGGSGLGMDPMLPSIS 989


>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  276 bits (705), Expect = 2e-72
 Identities = 138/154 (89%), Positives = 146/154 (94%)
 Frame = -3

Query: 497  SFYNEGEADIVVQHVFSLLYAGVSPSAIAVQSPYVAQVQLLRDRLDELPGARGIDVATID 318
            SFYNEGEADIVVQHV SL+ AGVSP+AIAVQSPYVAQVQLLRDRLDE+P A G++VATID
Sbjct: 636  SFYNEGEADIVVQHVLSLISAGVSPTAIAVQSPYVAQVQLLRDRLDEIPEAVGVEVATID 695

Query: 317  SFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 138
            SFQGREADAVIISMVRSNT+GAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR
Sbjct: 696  SFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 755

Query: 137  LLRHIRYFGRVKHTETGSFGGSGLGMNPMLPSVS 36
            LLRHIRY GRVKH E G+FGGSGLGMNPMLP +S
Sbjct: 756  LLRHIRYIGRVKHAEPGTFGGSGLGMNPMLPFIS 789


>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  276 bits (705), Expect = 2e-72
 Identities = 138/154 (89%), Positives = 146/154 (94%)
 Frame = -3

Query: 497  SFYNEGEADIVVQHVFSLLYAGVSPSAIAVQSPYVAQVQLLRDRLDELPGARGIDVATID 318
            SFYNEGEADIVVQHV SL+ AGVSP+AIAVQSPYVAQVQLLRDRLDE+P A G++VATID
Sbjct: 800  SFYNEGEADIVVQHVLSLISAGVSPTAIAVQSPYVAQVQLLRDRLDEIPEAVGVEVATID 859

Query: 317  SFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 138
            SFQGREADAVIISMVRSNT+GAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR
Sbjct: 860  SFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 919

Query: 137  LLRHIRYFGRVKHTETGSFGGSGLGMNPMLPSVS 36
            LLRHIRY GRVKH E G+FGGSGLGMNPMLP +S
Sbjct: 920  LLRHIRYIGRVKHAEPGTFGGSGLGMNPMLPFIS 953


>ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|222857607|gb|EEE95154.1|
            predicted protein [Populus trichocarpa]
          Length = 788

 Score =  271 bits (693), Expect = 4e-71
 Identities = 134/154 (87%), Positives = 145/154 (94%)
 Frame = -3

Query: 497  SFYNEGEADIVVQHVFSLLYAGVSPSAIAVQSPYVAQVQLLRDRLDELPGARGIDVATID 318
            SFYNEGEADIVVQHV SL+++GV P+AIAVQSPYVAQVQLLR+RLDELP A G+++ATID
Sbjct: 635  SFYNEGEADIVVQHVSSLIFSGVRPTAIAVQSPYVAQVQLLRERLDELPEADGVEIATID 694

Query: 317  SFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 138
            SFQGREADAVIISMVRSNT+GAVGFLGDS+R NVAITRARKHVAVVCDSSTICHNTFLAR
Sbjct: 695  SFQGREADAVIISMVRSNTLGAVGFLGDSKRTNVAITRARKHVAVVCDSSTICHNTFLAR 754

Query: 137  LLRHIRYFGRVKHTETGSFGGSGLGMNPMLPSVS 36
            LLRHIRYFGRVKH E GSFGGSG  MNPMLPS+S
Sbjct: 755  LLRHIRYFGRVKHAEPGSFGGSGFDMNPMLPSIS 788


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
            gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
            protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score =  271 bits (692), Expect = 5e-71
 Identities = 135/154 (87%), Positives = 145/154 (94%)
 Frame = -3

Query: 497  SFYNEGEADIVVQHVFSLLYAGVSPSAIAVQSPYVAQVQLLRDRLDELPGARGIDVATID 318
            S YNEGEADIVVQHV SL+Y+GVSP AIAVQSPYVAQVQLLR+RLDE+P + GI+VATID
Sbjct: 804  SLYNEGEADIVVQHVCSLIYSGVSPRAIAVQSPYVAQVQLLRNRLDEIPESAGIEVATID 863

Query: 317  SFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLAR 138
            SFQGREADAVIISMVRSN +GAVGFLGDSRRMNVAITRARKHVA+VCDSSTIC NTFLAR
Sbjct: 864  SFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVALVCDSSTICQNTFLAR 923

Query: 137  LLRHIRYFGRVKHTETGSFGGSGLGMNPMLPSVS 36
            LLRHIRYFGRVKH E GSFGGSGLGMNPMLPS++
Sbjct: 924  LLRHIRYFGRVKHAEPGSFGGSGLGMNPMLPSIN 957


Top