BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036377
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|2...   207   5e-52
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   207   9e-52
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   196   2e-48
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   195   4e-48
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   191   5e-47

>ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|222857331|gb|EEE94878.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  207 bits (528), Expect = 5e-52
 Identities = 101/138 (73%), Positives = 117/138 (84%)
 Frame = +3

Query: 3   NRLDRDTSGVMLITKSHKVAAKLVKAFTDHRVRKTYIAFCTGVAPKWRCINIKSGHGRSK 182
           NRLDRDTSGVM+ITK HKVA+KLVKAFTDH+VRKTYIA C G APKW  I IKSGHGRSK
Sbjct: 49  NRLDRDTSGVMVITKLHKVASKLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSK 108

Query: 183 FGAWRVYAESDVGRKLPGGSAIRDMETLFEVLSVNGQCCSKDLSELEKDENVMVVEEKSI 362
           FGA+RVYA SDVGR LPGGS ++DMET FEVLS+NGQ   ++ SE   D+N++VVEEK++
Sbjct: 109 FGAFRVYAASDVGRSLPGGSTVKDMETSFEVLSINGQGSFREPSEFNSDKNILVVEEKAV 168

Query: 363 IDFREKKDEIVVRAYPRS 416
           ID   KKDEI+VRA+PRS
Sbjct: 169 IDTDAKKDEILVRAFPRS 186


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/138 (72%), Positives = 118/138 (85%)
 Frame = +3

Query: 3   NRLDRDTSGVMLITKSHKVAAKLVKAFTDHRVRKTYIAFCTGVAPKWRCINIKSGHGRSK 182
           NRLDRDTSGVM+ITKSHKVA+KLVKAFTDH+++KTYIA C G+APKW  I IKSGHGRSK
Sbjct: 112 NRLDRDTSGVMVITKSHKVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSK 171

Query: 183 FGAWRVYAESDVGRKLPGGSAIRDMETLFEVLSVNGQCCSKDLSELEKDENVMVVEEKSI 362
           FG WRVYA SDVG+ LPGGS ++DMET FE+LSVNGQ   K+LSE EKDEN++VVEEK+ 
Sbjct: 172 FGVWRVYAASDVGQTLPGGSTVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAA 231

Query: 363 IDFREKKDEIVVRAYPRS 416
            +   KK EI+VRA+P+S
Sbjct: 232 KNADVKKVEILVRAFPQS 249


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/139 (67%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   NRLDRDTSGVMLITKSHKVAAKLVKAFTDHRVRKTYIAFCTGVAPKWRCINIKSGHGRSK 182
           NRLDRDTSGVM+ITKSHKVA+KLVKAFTDH V K+YIAFC G +PKW+ IN+KSGHGRSK
Sbjct: 142 NRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSK 201

Query: 183 FGAWRVYAESDVGRKLPGGSAIRDMETLFEVLSVNGQCCSKDLSELEK-DENVMVVEEKS 359
           FG WRVYA +DVGR LPGGS +RDMET FEVLSVNG+   ++L +  + +E  +VV  KS
Sbjct: 202 FGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKS 261

Query: 360 IIDFREKKDEIVVRAYPRS 416
           ++D    KDEI++RA PRS
Sbjct: 262 LVDIDSHKDEILIRARPRS 280


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/139 (67%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   NRLDRDTSGVMLITKSHKVAAKLVKAFTDHRVRKTYIAFCTGVAPKWRCINIKSGHGRSK 182
           NRLDRDTSGVM+ITKSHKVA+KLVKAFTDH V K+YIAFC G +PKW  IN+KSGHGRSK
Sbjct: 142 NRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSK 201

Query: 183 FGAWRVYAESDVGRKLPGGSAIRDMETLFEVLSVNGQCCSKDLSELEK-DENVMVVEEKS 359
           FG WRVYA +DVGR LPGGS +RDMET FEVLSVNG+   ++L +  + +E  +VV  KS
Sbjct: 202 FGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKS 261

Query: 360 IIDFREKKDEIVVRAYPRS 416
           ++D    KDEI++RA PRS
Sbjct: 262 LVDIDSHKDEILIRARPRS 280


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  191 bits (485), Expect = 5e-47
 Identities = 97/139 (69%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   NRLDRDTSGVMLITKSHKVAAKLVKAFTDHRVRKTYIAFCTGVAPKWRCINIKSGHGRSK 182
           NRLDRDTSGVM+ITKSH+VAAKL+KAF+D +V KTY+A C G AP W  I IKSGHGRSK
Sbjct: 136 NRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSK 195

Query: 183 FGAWRVYAESDVGRKLPGGSAIRDMETLFEVLSVNGQCCSKDLSELEK-DENVMVVEEKS 359
           FGAWRVYA SDVGR LP   AI+DM T FEVLSVNGQ   K+L E  K DE V+VVEE+S
Sbjct: 196 FGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERS 255

Query: 360 IIDFREKKDEIVVRAYPRS 416
           +ID   ++DEI+VRA+PRS
Sbjct: 256 VIDSNARQDEILVRAFPRS 274