BLASTX nr result

ID: Panax21_contig00036375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036375
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]   240   4e-61
ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ...   229   9e-58
ref|XP_002264416.2| PREDICTED: probable cyclic nucleotide-gated ...   218   2e-54
emb|CBI24092.3| unnamed protein product [Vitis vinifera]              218   2e-54
ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putativ...   214   3e-53

>emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]
          Length = 731

 Score =  240 bits (612), Expect = 4e-61
 Identities = 121/180 (67%), Positives = 142/180 (78%)
 Frame = -2

Query: 542 MVYKKEKLVRFYNNGKQNPELSWEKNDMKNVEKQSPQYKISAPLLRPESSNSSAGKARPN 363
           M +KKEKLVRF ++ KQN E+SWEK + +  E+    YK+   LL PE    +  K R  
Sbjct: 1   MEFKKEKLVRFCSDEKQNLEVSWEKGESQPXERPV-SYKVLPSLLNPEGR--AGEKNRTY 57

Query: 362 GGLKFGNSKVFPKSHEPKGKQMLDPGSDIFLQWNRIFLFSCLVALFVDPLFFYLPSVENH 183
           G L FG  KVFP+SHEP  K++LDPGSDIFLQWNR+FLFSCLVALFVDPLFFYLP+V   
Sbjct: 58  GTLSFGRFKVFPESHEPWRKRILDPGSDIFLQWNRVFLFSCLVALFVDPLFFYLPTVVGD 117

Query: 182 ENSSCMMTDLNLGIIVTCFRTVADIFYVLHIFIKFRTAYVSPSSRVFGRGELVMDPSKIA 3
            NSSC+ TDLNLGI+VTCFRT+AD+FY+LH+ IKFRTAYVSPSSRVFGRGELVMDP +IA
Sbjct: 118 GNSSCVKTDLNLGIVVTCFRTIADVFYLLHMAIKFRTAYVSPSSRVFGRGELVMDPKEIA 177


>ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Vitis
           vinifera]
          Length = 726

 Score =  229 bits (583), Expect = 9e-58
 Identities = 115/171 (67%), Positives = 135/171 (78%)
 Frame = -2

Query: 515 RFYNNGKQNPELSWEKNDMKNVEKQSPQYKISAPLLRPESSNSSAGKARPNGGLKFGNSK 336
           RF ++ KQN E+SWEK + + VE+    YK+   LL PE    +  K R  G L FG  K
Sbjct: 5   RFCSDEKQNLEVSWEKGESQPVERPV-SYKVLPSLLNPEGR--AGEKNRTYGTLSFGRFK 61

Query: 335 VFPKSHEPKGKQMLDPGSDIFLQWNRIFLFSCLVALFVDPLFFYLPSVENHENSSCMMTD 156
           VFP+SHEP  K++LDPGSDIFLQWNR+FLFSCLVALFVDPLFFYLP+V    NSSC+ TD
Sbjct: 62  VFPESHEPWRKRILDPGSDIFLQWNRVFLFSCLVALFVDPLFFYLPTVVGDGNSSCVKTD 121

Query: 155 LNLGIIVTCFRTVADIFYVLHIFIKFRTAYVSPSSRVFGRGELVMDPSKIA 3
           LNLGI+VTCFRT+AD+FY+LH+ IKFRTAYVSPSSRVFGRGELVMDP +IA
Sbjct: 122 LNLGIVVTCFRTIADVFYLLHMAIKFRTAYVSPSSRVFGRGELVMDPKEIA 172


>ref|XP_002264416.2| PREDICTED: probable cyclic nucleotide-gated ion channel 17-like
           [Vitis vinifera]
          Length = 723

 Score =  218 bits (555), Expect = 2e-54
 Identities = 110/180 (61%), Positives = 136/180 (75%)
 Frame = -2

Query: 542 MVYKKEKLVRFYNNGKQNPELSWEKNDMKNVEKQSPQYKISAPLLRPESSNSSAGKARPN 363
           M  KKEK+VRFY++  Q+ E  W KND   + K S   K+S+  L+P ++  S  K    
Sbjct: 1   MELKKEKIVRFYSDENQHQE--WGKNDPLLLGKSSSIDKVSSSFLKPHNAVRSRNKIPET 58

Query: 362 GGLKFGNSKVFPKSHEPKGKQMLDPGSDIFLQWNRIFLFSCLVALFVDPLFFYLPSVENH 183
             LKFG SKVFP+ HEP  KQ+LDPGS++ LQW+R+F+ SCLVALFVDPL+FYLP+V  +
Sbjct: 59  --LKFGRSKVFPEDHEPWRKQILDPGSELVLQWSRVFIVSCLVALFVDPLYFYLPAVGGN 116

Query: 182 ENSSCMMTDLNLGIIVTCFRTVADIFYVLHIFIKFRTAYVSPSSRVFGRGELVMDPSKIA 3
           E S C+ TDLNL I+VTCFRT+AD FY+LH+ IKFRTAYV+PSSRVFGRGELVMDP KIA
Sbjct: 117 EGSWCIKTDLNLRIVVTCFRTIADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKKIA 176


>emb|CBI24092.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  218 bits (555), Expect = 2e-54
 Identities = 110/180 (61%), Positives = 136/180 (75%)
 Frame = -2

Query: 542 MVYKKEKLVRFYNNGKQNPELSWEKNDMKNVEKQSPQYKISAPLLRPESSNSSAGKARPN 363
           M  KKEK+VRFY++  Q+ E  W KND   + K S   K+S+  L+P ++  S  K    
Sbjct: 1   MELKKEKIVRFYSDENQHQE--WGKNDPLLLGKSSSIDKVSSSFLKPHNAVRSRNKIPET 58

Query: 362 GGLKFGNSKVFPKSHEPKGKQMLDPGSDIFLQWNRIFLFSCLVALFVDPLFFYLPSVENH 183
             LKFG SKVFP+ HEP  KQ+LDPGS++ LQW+R+F+ SCLVALFVDPL+FYLP+V  +
Sbjct: 59  --LKFGRSKVFPEDHEPWRKQILDPGSELVLQWSRVFIVSCLVALFVDPLYFYLPAVGGN 116

Query: 182 ENSSCMMTDLNLGIIVTCFRTVADIFYVLHIFIKFRTAYVSPSSRVFGRGELVMDPSKIA 3
           E S C+ TDLNL I+VTCFRT+AD FY+LH+ IKFRTAYV+PSSRVFGRGELVMDP KIA
Sbjct: 117 EGSWCIKTDLNLRIVVTCFRTIADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKKIA 176


>ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223545309|gb|EEF46814.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 629

 Score =  214 bits (544), Expect = 3e-53
 Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 3/183 (1%)
 Frame = -2

Query: 542 MVYKKEKLVRFYNNGKQNPELSWEKNDMKNVEKQSPQYKISAPLLRPESSNSSAGKARPN 363
           M +KKEKLVRF              N+++++EK  P Y +S  LL+ E S S      P 
Sbjct: 1   MDFKKEKLVRF--------------NEIQHLEKPLPLYTVSGQLLKAEGSASD-----PK 41

Query: 362 GGLKF---GNSKVFPKSHEPKGKQMLDPGSDIFLQWNRIFLFSCLVALFVDPLFFYLPSV 192
            G KF   G  KVFP++HEP  K++LDPG+D++LQWNR+FLFSCLVALFVDPLFFYLPSV
Sbjct: 42  TGHKFPKLGRFKVFPENHEPWRKRILDPGTDVYLQWNRVFLFSCLVALFVDPLFFYLPSV 101

Query: 191 ENHENSSCMMTDLNLGIIVTCFRTVADIFYVLHIFIKFRTAYVSPSSRVFGRGELVMDPS 12
            N   +SCM TDLNLGI VTCFRT ADIFY+LH+ +KFRTAYV+PSSRVFGRGELV+DP 
Sbjct: 102 ANRGVTSCMDTDLNLGITVTCFRTFADIFYILHLVVKFRTAYVAPSSRVFGRGELVVDPK 161

Query: 11  KIA 3
           KI+
Sbjct: 162 KIS 164


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