BLASTX nr result

ID: Panax21_contig00036367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036367
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   364   3e-98
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   352   2e-94
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   346   8e-93
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...   321   3e-85

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like
            [Vitis vinifera]
          Length = 492

 Score =  384 bits (987), Expect = e-104
 Identities = 190/330 (57%), Positives = 238/330 (72%)
 Frame = +1

Query: 1    LLIKSCLQAKRIDQSIEIVRMLRSRGIFPLIGTCNSLIRIVSKCQDCCAGYDMYQEIFGF 180
            LLIK+CL +KRI+QSI IV+MLRSRGI P I TCN+LI  VS+ + C AGY++Y+E+FG 
Sbjct: 163  LLIKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEIYREVFGS 222

Query: 181  DXXXXXXXXXXXXXXXXXXXXXXQTFNIIMLAFYKDGLVGNVEEVWDEMLRVNCKPNVDS 360
                                    TFN +M+ FY+DG V  VEE+W EM   +C PN  S
Sbjct: 223  WDDEINEKVRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYS 282

Query: 361  YSILMAAYCQDEKLGEAMRVWEEMGAKNVKHDLVAYNTIIGGFCKIGEVGRAEEFFREMG 540
            YS+LMAA+C + ++GE  ++WEEM  K ++HD++AYNTIIGGFC+IGE+ R EE FREM 
Sbjct: 283  YSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREME 342

Query: 541  LNGVESTCVTFEHLIFGYCTIGDVDSALLLYKDMCRKGFRPESFTIDEVIRGLCGKNRFS 720
            L+G++STCVT+EHLI GYC IGDVDSA+LLYKDMCRKGFR E+ T+D +I  LC   R  
Sbjct: 343  LSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVH 402

Query: 721  EALEYLRVAIKKHDIVPKGKSYEFLIKGLCQEGRFEEGLKLQVEMVGKGYEPNSEIYNAF 900
            EAL+ LRVA+   +  P+GKSYE LIKG C+EG+ EE  KLQ EMVGKG++P  EIY+AF
Sbjct: 403  EALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAF 462

Query: 901  INGYMKQGNEEQAGKLRKEMIEIQELQESN 990
            I+GYMKQGN+E A  LRKEM E Q  QE N
Sbjct: 463  IDGYMKQGNKEIAETLRKEMFETQMQQEEN 492


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  364 bits (935), Expect = 3e-98
 Identities = 184/330 (55%), Positives = 229/330 (69%)
 Frame = +1

Query: 1    LLIKSCLQAKRIDQSIEIVRMLRSRGIFPLIGTCNSLIRIVSKCQDCCAGYDMYQEIFGF 180
            LLIKSCL+ K+ID  ++IVR+LRSRGI PLI TCN L+  VSKC+ C AGY +++E+F  
Sbjct: 165  LLIKSCLELKKIDDGLKIVRLLRSRGISPLISTCNFLVSWVSKCKGCYAGYGVFREVFEV 224

Query: 181  DXXXXXXXXXXXXXXXXXXXXXXQTFNIIMLAFYKDGLVGNVEEVWDEMLRVNCKPNVDS 360
            +                       TFN +M+ FY+DG +  VEEVW EM R  C PN  S
Sbjct: 225  NDNEGKRVIKVRPNV--------HTFNELMMGFYRDGELEMVEEVWSEMERFECVPNGFS 276

Query: 361  YSILMAAYCQDEKLGEAMRVWEEMGAKNVKHDLVAYNTIIGGFCKIGEVGRAEEFFREMG 540
            YS+LM  +    +  E  ++WEEM AK +K D+VAYNT+IGGFCKIGE+ +AEE  REM 
Sbjct: 277  YSVLMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEELSREME 336

Query: 541  LNGVESTCVTFEHLIFGYCTIGDVDSALLLYKDMCRKGFRPESFTIDEVIRGLCGKNRFS 720
            LNGVE+ CVTFEHLI GYC++GDVDSA+L++K M RKGFR E   +D +I GLC K R S
Sbjct: 337  LNGVEANCVTFEHLINGYCSVGDVDSAILVFKHMVRKGFRAEGSVMDVLIGGLCEKRRVS 396

Query: 721  EALEYLRVAIKKHDIVPKGKSYEFLIKGLCQEGRFEEGLKLQVEMVGKGYEPNSEIYNAF 900
            EALE +R+A++       GKSYE LIKGLC++G+ +E LKLQ EMVG G+EPN EIY AF
Sbjct: 397  EALEIMRIAMRNDGFRLSGKSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAF 456

Query: 901  INGYMKQGNEEQAGKLRKEMIEIQELQESN 990
            I+GYMK GNEE A  LRKEM  IQ+ QE N
Sbjct: 457  IDGYMKLGNEEMAAMLRKEMSGIQKRQEEN 486


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
            predicted protein [Populus trichocarpa]
          Length = 498

 Score =  352 bits (902), Expect = 2e-94
 Identities = 177/334 (52%), Positives = 231/334 (69%)
 Frame = +1

Query: 1    LLIKSCLQAKRIDQSIEIVRMLRSRGIFPLIGTCNSLIRIVSKCQDCCAGYDMYQEIFGF 180
            LLIKSCL+ K+ID SIEIV+MLRS+GI P I TCN+LI  VS+C+    GY +++E+FG 
Sbjct: 169  LLIKSCLELKKIDGSIEIVKMLRSKGISPSISTCNALISEVSRCKGSFVGYGVFKEVFGL 228

Query: 181  DXXXXXXXXXXXXXXXXXXXXXXQTFNIIMLAFYKDGLVGNVEEVWDEMLRVNCKPNVDS 360
            +                       +FN +M+ FY++G V  VEE+W EM R  C  N  S
Sbjct: 229  ESCELGEKMRRGFRVRPNV----HSFNELMVGFYRNGEVEMVEEIWSEMERFGCVANGFS 284

Query: 361  YSILMAAYCQDEKLGEAMRVWEEMGAKNVKHDLVAYNTIIGGFCKIGEVGRAEEFFREMG 540
            Y +L+A +C+  +L EA R+W+EM  K +  D+VAYNTIIGGFCK GEV +AE  FREMG
Sbjct: 285  YGVLIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMG 344

Query: 541  LNGVESTCVTFEHLIFGYCTIGDVDSALLLYKDMCRKGFRPESFTIDEVIRGLCGKNRFS 720
            L+G+ES+CVTFEHLI GYC IGDV+SA+L+YKDM R+ FR E+ T++ +I GLC + R  
Sbjct: 345  LSGIESSCVTFEHLIEGYCRIGDVNSAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVF 404

Query: 721  EALEYLRVAIKKHDIVPKGKSYEFLIKGLCQEGRFEEGLKLQVEMVGKGYEPNSEIYNAF 900
            EAL+ +R A++     P GKSYE LI GLC++G+ EE LKLQ EMVGKG++PNS IY AF
Sbjct: 405  EALKIMRSAMRDVSFHPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAF 464

Query: 901  INGYMKQGNEEQAGKLRKEMIEIQELQESN*ICD 1002
            I GY+K GNEE A  LRKEM   Q+ Q+ + + D
Sbjct: 465  IEGYVKLGNEEMAAMLRKEMSVAQKQQQEDNVTD 498


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like
            [Glycine max]
          Length = 487

 Score =  346 bits (888), Expect = 8e-93
 Identities = 173/324 (53%), Positives = 229/324 (70%)
 Frame = +1

Query: 1    LLIKSCLQAKRIDQSIEIVRMLRSRGIFPLIGTCNSLIRIVSKCQDCCAGYDMYQEIFGF 180
            LLIK+CL +K++D SIEIVRML SRGI P + T NSLI  V K +    GY +Y+E F  
Sbjct: 165  LLIKACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREFFRL 224

Query: 181  DXXXXXXXXXXXXXXXXXXXXXXQTFNIIMLAFYKDGLVGNVEEVWDEMLRVNCKPNVDS 360
            D                       T+N +ML  Y+DGLV  VE++W EM + N KPN  S
Sbjct: 225  DEENNEISKRGSGFRVTPNV---HTYNDLMLCCYQDGLVERVEKIWIEM-KCNYKPNAYS 280

Query: 361  YSILMAAYCQDEKLGEAMRVWEEMGAKNVKHDLVAYNTIIGGFCKIGEVGRAEEFFREMG 540
            YS+LMA +C + ++G+A ++WEE+ ++ ++ D+V+YNTIIGGFC IG+VGRAEEFFREM 
Sbjct: 281  YSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMA 340

Query: 541  LNGVESTCVTFEHLIFGYCTIGDVDSALLLYKDMCRKGFRPESFTIDEVIRGLCGKNRFS 720
            + GV +T  T+EHL+ GYC IGDVDSA+L+YKDM R   RP++ T+D +IR LC K R  
Sbjct: 341  VAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIRLLCDKGRVR 400

Query: 721  EALEYLRVAIKKHDIVPKGKSYEFLIKGLCQEGRFEEGLKLQVEMVGKGYEPNSEIYNAF 900
            E+LE++R A+ K D++P  KSYE LIKGLC +GR EE LK+Q EMVGKG++PNSEIY AF
Sbjct: 401  ESLEFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAF 460

Query: 901  INGYMKQGNEEQAGKLRKEMIEIQ 972
            ++GY++ GNEE A  LRKEM++ Q
Sbjct: 461  VDGYVRHGNEEMAEALRKEMLQNQ 484


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like
            [Cucumis sativus]
          Length = 499

 Score =  321 bits (823), Expect = 3e-85
 Identities = 166/324 (51%), Positives = 212/324 (65%)
 Frame = +1

Query: 1    LLIKSCLQAKRIDQSIEIVRMLRSRGIFPLIGTCNSLIRIVSKCQDCCAGYDMYQEIFGF 180
            LLIK+ L +K++D SIEIVRMLRSRGI P + T NSLI +VSKCQ     Y +++E+FG 
Sbjct: 178  LLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGL 237

Query: 181  DXXXXXXXXXXXXXXXXXXXXXXQTFNIIMLAFYKDGLVGNVEEVWDEMLRVNCKPNVDS 360
            D                       TFN +M  FY+DG VG V+E+WD++   N  PN  S
Sbjct: 238  DCEIEEEHVKLKGRVSPNV----HTFNTLMDCFYRDGFVGRVKEIWDQLADSNSTPNSYS 293

Query: 361  YSILMAAYCQDEKLGEAMRVWEEMGAKNVKHDLVAYNTIIGGFCKIGEVGRAEEFFREMG 540
            YSILM   C++++ GEA  +WEEM  K ++ D+VAYNTIIGGFCK G   RAEEF+REM 
Sbjct: 294  YSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREME 353

Query: 541  LNGVESTCVTFEHLIFGYCTIGDVDSALLLYKDMCRKGFRPESFTIDEVIRGLCGKNRFS 720
            L+G+EST  T EHLI GYC  GDVDSALL+YKDM RK F   + T++ +IR LC + R  
Sbjct: 354  LSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLL 413

Query: 721  EALEYLRVAIKKHDIVPKGKSYEFLIKGLCQEGRFEEGLKLQVEMVGKGYEPNSEIYNAF 900
            EAL+    AI+     P  +++E LI  LCQEG+ E   KLQ +MVGKG++PN +IY +F
Sbjct: 414  EALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSF 473

Query: 901  INGYMKQGNEEQAGKLRKEMIEIQ 972
            I+ Y K+GN E   KL KEM EIQ
Sbjct: 474  IDAYTKEGNAEMVEKLWKEMHEIQ 497


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