BLASTX nr result

ID: Panax21_contig00036354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036354
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151964.1| PREDICTED: psbQ-like protein 2, chloroplasti...   170   1e-40
ref|NP_566137.1| photosystem II oxygen-evolving enhancer protein...   161   6e-38
gb|AAM61735.1| unknown [Arabidopsis thaliana]                         160   1e-37
ref|XP_002884281.1| oxygen evolving enhancer 3 family protein [A...   159   2e-37
ref|XP_002282744.1| PREDICTED: oxygen-evolving enhancer protein ...   159   2e-37

>ref|XP_004151964.1| PREDICTED: psbQ-like protein 2, chloroplastic-like [Cucumis
           sativus] gi|449526650|ref|XP_004170326.1| PREDICTED:
           psbQ-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 215

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/131 (66%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   VNNKIANEETGTRSFLKKGVYIADIGTKGRQYRVYKYXXXXXXXXXXXXXXXXSYVRKYL 182
           V+N I NE+TGTRSFLK G+YIA+IGTKGR+YR+ KY                +YVRKYL
Sbjct: 85  VDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYL 144

Query: 183 RLKSTFMYYDFDKLISAASND-KQPLTDLANRLFDTVEKLEDAVKEHNLSRTQSYYEDTT 359
           RLKSTFMYYDFDK+ISAA++D KQPL DLANRLFD  EKLEDA K+ NLS T+SYY+ TT
Sbjct: 145 RLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTT 204

Query: 360 AILQEVMTKMA 392
            ILQEVM +MA
Sbjct: 205 PILQEVMDRMA 215


>ref|NP_566137.1| photosystem II oxygen-evolving enhancer protein [Arabidopsis
           thaliana] gi|75204862|sp|Q9SGH4.1|PQL2_ARATH RecName:
           Full=PsbQ-like protein 2, chloroplastic; AltName:
           Full=Protein photosynthetic NDH subcomplex L 3; Flags:
           Precursor gi|6692264|gb|AAF24614.1|AC010870_7
           hypothetical protein [Arabidopsis thaliana]
           gi|17979498|gb|AAL50085.1| AT3g01440/T13O15_8
           [Arabidopsis thaliana] gi|20147295|gb|AAM10361.1|
           AT3g01440/T13O15_8 [Arabidopsis thaliana]
           gi|332640146|gb|AEE73667.1| photosystem II
           oxygen-evolving enhancer protein [Arabidopsis thaliana]
          Length = 220

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/131 (63%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   VNNKIANEETGTRSFLKKGVYIADIGTKGRQYRVYKYXXXXXXXXXXXXXXXXSYVRKYL 182
           + N I NE+TGTR+F+KKGVY+ADIGTKGR YRV K                 +YV+KYL
Sbjct: 90  IYNNIVNEKTGTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYL 149

Query: 183 RLKSTFMYYDFDKLISAA-SNDKQPLTDLANRLFDTVEKLEDAVKEHNLSRTQSYYEDTT 359
           RLKSTF++YDFD LISAA S DKQPLTDLANRLFD  EKLEDA K  NL+ T+S Y+DT 
Sbjct: 150 RLKSTFLFYDFDNLISAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKDTK 209

Query: 360 AILQEVMTKMA 392
            +LQEVMT+MA
Sbjct: 210 FLLQEVMTRMA 220


>gb|AAM61735.1| unknown [Arabidopsis thaliana]
          Length = 220

 Score =  160 bits (404), Expect = 1e-37
 Identities = 82/131 (62%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   VNNKIANEETGTRSFLKKGVYIADIGTKGRQYRVYKYXXXXXXXXXXXXXXXXSYVRKYL 182
           + N I NE+TGTR+F+KKGVY+ADIGTKGR YRV K                 +YV+KYL
Sbjct: 90  IYNNIVNEKTGTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYL 149

Query: 183 RLKSTFMYYDFDKLISAA-SNDKQPLTDLANRLFDTVEKLEDAVKEHNLSRTQSYYEDTT 359
           RLKSTF++YDFD LISAA S DKQPLTDLAN+LFD  EKLEDA K  NL+ T+S Y+DT 
Sbjct: 150 RLKSTFLFYDFDNLISAAASEDKQPLTDLANKLFDNFEKLEDAAKTKNLAETESCYKDTK 209

Query: 360 AILQEVMTKMA 392
            +LQEVMT+MA
Sbjct: 210 FLLQEVMTRMA 220


>ref|XP_002884281.1| oxygen evolving enhancer 3 family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330121|gb|EFH60540.1| oxygen
           evolving enhancer 3 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 220

 Score =  159 bits (403), Expect = 2e-37
 Identities = 82/131 (62%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   VNNKIANEETGTRSFLKKGVYIADIGTKGRQYRVYKYXXXXXXXXXXXXXXXXSYVRKYL 182
           + N I NE+TGTR+F+KKGVY+ADIGTKGR YRV K                 +YV+KYL
Sbjct: 90  IYNNIVNEKTGTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYL 149

Query: 183 RLKSTFMYYDFDKLISAA-SNDKQPLTDLANRLFDTVEKLEDAVKEHNLSRTQSYYEDTT 359
           RLKSTF++YDFD LISAA S DKQPLTDLANRLFD  EKLEDA K  NL+ T+S Y++T 
Sbjct: 150 RLKSTFLFYDFDNLISAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKNTK 209

Query: 360 AILQEVMTKMA 392
            +LQEVMT+MA
Sbjct: 210 ILLQEVMTRMA 220


>ref|XP_002282744.1| PREDICTED: oxygen-evolving enhancer protein 3-1, chloroplastic
           [Vitis vinifera] gi|147768263|emb|CAN78127.1|
           hypothetical protein VITISV_028757 [Vitis vinifera]
           gi|302143202|emb|CBI20497.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  159 bits (403), Expect = 2e-37
 Identities = 84/131 (64%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   VNNKIANEETGTRSFLKKGVYIADIGTKGRQYRVYKYXXXXXXXXXXXXXXXXSYVRKYL 182
           V+N I N+ETGTRSFLKKG+YIAD+GTKGR  R+ KY                +Y  KYL
Sbjct: 91  VDNDIVNKETGTRSFLKKGLYIADVGTKGRMLRLKKYAFDLIALEDLMDKDAWNYFTKYL 150

Query: 183 RLKSTFMYYDFDKLISAASND-KQPLTDLANRLFDTVEKLEDAVKEHNLSRTQSYYEDTT 359
           RLKSTFMYYDFDKLISA   D KQPLTDLANRLFD VEKLEDAVK  ++S+T+S Y+DT 
Sbjct: 151 RLKSTFMYYDFDKLISAVPVDEKQPLTDLANRLFDCVEKLEDAVKIRDISQTESRYKDTK 210

Query: 360 AILQEVMTKMA 392
            +LQEVM +MA
Sbjct: 211 TVLQEVMDRMA 221


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