BLASTX nr result

ID: Panax21_contig00036340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036340
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD94148.1| hypothetical protein [Arabidopsis thaliana]            59   5e-07
ref|XP_002888688.1| hypothetical protein ARALYDRAFT_894668 [Arab...    57   1e-06
ref|XP_002315986.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
dbj|BAJ94497.1| predicted protein [Hordeum vulgare subsp. vulgar...    55   6e-06

>dbj|BAD94148.1| hypothetical protein [Arabidopsis thaliana]
          Length = 38

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +2

Query: 239 MDLVVAGISLMIGLGLFAFIASILCSAAFLHNAKDLS 349
           MDL+VAGISLM+GLG FA IASILCS AF H+AK  S
Sbjct: 1   MDLIVAGISLMVGLGFFALIASILCSVAFFHHAKAAS 37


>ref|XP_002888688.1| hypothetical protein ARALYDRAFT_894668 [Arabidopsis lyrata subsp.
           lyrata] gi|297334529|gb|EFH64947.1| hypothetical protein
           ARALYDRAFT_894668 [Arabidopsis lyrata subsp. lyrata]
          Length = 59

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +2

Query: 221 VSVQCLMDLVVAGISLMIGLGLFAFIASILCSAAFLHNAK 340
           VS+Q  MDL+VAG SL+IG G FA IAS+LCS AF H+ K
Sbjct: 5   VSIQTAMDLIVAGFSLIIGFGFFALIASVLCSVAFFHHVK 44


>ref|XP_002315986.1| predicted protein [Populus trichocarpa] gi|222865026|gb|EEF02157.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = +1

Query: 178 RECVKRGKD-DVGDGSECAV-FNGLGGGGDFSDDWAGSFRFYCFYSLLCCFLT*RQGSFL 351
           +E  K  KD +  DG+   V  NG  G  DF  DW G FRFYCF+SLLCCF + RQ   L
Sbjct: 3   KEQTKTSKDREEEDGAVDGVKHNGFSGSRDFLGDWFGYFRFYCFHSLLCCFPSQRQACVL 62

Query: 352 I 354
           I
Sbjct: 63  I 63


>dbj|BAJ94497.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326502176|dbj|BAK06779.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 51

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = +2

Query: 230 QCLMDLVVAGISLMIGLGLFAFIASILCSAAFLHNAKDLS 349
           Q L+DL VAG+SLM  LGLFA + ++LCSAAFLH++K ++
Sbjct: 11  QLLLDLAVAGLSLMFALGLFAVVTTVLCSAAFLHHSKPIA 50


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