BLASTX nr result

ID: Panax21_contig00036328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036328
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydr...   150   8e-35
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...   140   8e-32
emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]   140   8e-32
ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydr...   134   6e-30
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...   131   6e-29

>ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222838117|gb|EEE76482.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/97 (72%), Positives = 84/97 (86%)
 Frame = +1

Query: 124 MGSVGVLKNTVMICAPLMSHSVEQMVGDMYKAKEEGADIVEVRLDCVKNFRPRQDLEVIL 303
           MGSVGVL N+VM+CAPLM+ SVEQMV DM+ AK +GAD+VEVRLDC+  F+PRQDLE I+
Sbjct: 1   MGSVGVLTNSVMVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETII 60

Query: 304 KNKPLPVIIVCRPKWDGGQYDGDENMRLEVLRSAKEL 414
           +NKPLPVIIV RPKW+GGQY+GDE+ RLE LR A +L
Sbjct: 61  RNKPLPVIIVYRPKWEGGQYEGDEHRRLEALRLANDL 97


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204989|emb|CBI34296.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/97 (69%), Positives = 79/97 (81%)
 Frame = +1

Query: 124 MGSVGVLKNTVMICAPLMSHSVEQMVGDMYKAKEEGADIVEVRLDCVKNFRPRQDLEVIL 303
           M  VGVLK   MIC PLM  SVEQMV DM+KAK EGAD+VEVRLD + NF P+QDLE+IL
Sbjct: 1   MDDVGVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIIL 60

Query: 304 KNKPLPVIIVCRPKWDGGQYDGDENMRLEVLRSAKEL 414
           +NKPLPV+IV RPKW+GGQY+GDE+ RLE L  A++L
Sbjct: 61  RNKPLPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKL 97


>emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
          Length = 1071

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/97 (69%), Positives = 79/97 (81%)
 Frame = +1

Query: 124 MGSVGVLKNTVMICAPLMSHSVEQMVGDMYKAKEEGADIVEVRLDCVKNFRPRQDLEVIL 303
           M  VGVLK   MIC PLM  SVEQMV DM+KAK EGAD+VEVRLD + NF P+QDLE+IL
Sbjct: 1   MDDVGVLKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIIL 60

Query: 304 KNKPLPVIIVCRPKWDGGQYDGDENMRLEVLRSAKEL 414
           +NKPLPV+IV RPKW+GGQY+GDE+ RLE L  A++L
Sbjct: 61  RNKPLPVMIVYRPKWEGGQYEGDEHSRLEALHLAEKL 97



 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/93 (56%), Positives = 69/93 (74%)
 Frame = +1

Query: 136 GVLKNTVMICAPLMSHSVEQMVGDMYKAKEEGADIVEVRLDCVKNFRPRQDLEVILKNKP 315
           GV  N   +C PLM  +VEQM+ +M KAKE GADIVE+RLDC++NF P QDL++++K  P
Sbjct: 557 GVRSNPTFLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSP 616

Query: 316 LPVIIVCRPKWDGGQYDGDENMRLEVLRSAKEL 414
           LP ++  RP W+GGQY+GDEN R + LR A EL
Sbjct: 617 LPTLVTYRPIWEGGQYEGDENKRQDALRLAMEL 649


>ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222857959|gb|EEE95506.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/97 (64%), Positives = 78/97 (80%)
 Frame = +1

Query: 124 MGSVGVLKNTVMICAPLMSHSVEQMVGDMYKAKEEGADIVEVRLDCVKNFRPRQDLEVIL 303
           MG  G+L N+ M+CAPLM+ SVEQMV DM  A+ +GAD VEVRLD + +F+P QDLE I+
Sbjct: 1   MGRAGILANSTMVCAPLMARSVEQMVIDMQSAEAQGADAVEVRLDYINSFQPSQDLETII 60

Query: 304 KNKPLPVIIVCRPKWDGGQYDGDENMRLEVLRSAKEL 414
           +NKPLPVIIV RP+W+GGQY+GDE+ RLE LR A EL
Sbjct: 61  RNKPLPVIIVYRPRWEGGQYEGDEHTRLEALRLAHEL 97


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 519

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/94 (67%), Positives = 76/94 (80%)
 Frame = +1

Query: 124 MGSVGVLKNTVMICAPLMSHSVEQMVGDMYKAKEEGADIVEVRLDCVKNFRPRQDLEVIL 303
           MGSVG L ++VM+C PLM+ SVEQM+ DMY AK +GAD+VEVRLD + NF+P QDL+ IL
Sbjct: 1   MGSVGELTSSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAIL 60

Query: 304 KNKPLPVIIVCRPKWDGGQYDGDENMRLEVLRSA 405
           +NKPLPVIIV RPK +GG Y+GDE  RLE LR A
Sbjct: 61  RNKPLPVIIVYRPKSEGGLYEGDEPTRLEALRLA 94


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