BLASTX nr result

ID: Panax21_contig00036326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036326
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17529.3| unnamed protein product [Vitis vinifera]              199   1e-49
ref|XP_002267140.1| PREDICTED: scarecrow-like protein 4-like [Vi...   199   1e-49
emb|CAN74537.1| hypothetical protein VITISV_023717 [Vitis vinifera]   199   1e-49
ref|XP_002310226.1| GRAS family transcription factor [Populus tr...   194   6e-48
ref|XP_002327806.1| GRAS family transcription factor [Populus tr...   192   2e-47

>emb|CBI17529.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  199 bits (507), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 116/130 (89%)
 Frame = -1

Query: 392 QALATRTAGKPSKIRISGIPAPALGKSPAASLYATGNRLREFAKVLDLNFEFEPVLTPFQ 213
           QALATR+AGKP++IRISGIPAPALGKSPA+SL+ATGNRLR+FA++LDLNFEFEP+LTP Q
Sbjct: 341 QALATRSAGKPARIRISGIPAPALGKSPASSLFATGNRLRDFARLLDLNFEFEPILTPIQ 400

Query: 212 EFDGSSFRVDLDEALAVNFMLQLYNLLDESNDGIEAALKLAKSLNPIIVTLGEYEASFNR 33
           E + S+FRVD DE LAVNFMLQLYNLLDE+   + AAL+LAKSLNP I+TLGEYEA  N 
Sbjct: 401 ELNESTFRVDPDEVLAVNFMLQLYNLLDETPVSVNAALRLAKSLNPKIMTLGEYEACLNE 460

Query: 32  VEFLPRFKNA 3
           V+F+ RFKNA
Sbjct: 461 VDFINRFKNA 470


>ref|XP_002267140.1| PREDICTED: scarecrow-like protein 4-like [Vitis vinifera]
          Length = 616

 Score =  199 bits (507), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 116/130 (89%)
 Frame = -1

Query: 392 QALATRTAGKPSKIRISGIPAPALGKSPAASLYATGNRLREFAKVLDLNFEFEPVLTPFQ 213
           QALATR+AGKP++IRISGIPAPALGKSPA+SL+ATGNRLR+FA++LDLNFEFEP+LTP Q
Sbjct: 370 QALATRSAGKPARIRISGIPAPALGKSPASSLFATGNRLRDFARLLDLNFEFEPILTPIQ 429

Query: 212 EFDGSSFRVDLDEALAVNFMLQLYNLLDESNDGIEAALKLAKSLNPIIVTLGEYEASFNR 33
           E + S+FRVD DE LAVNFMLQLYNLLDE+   + AAL+LAKSLNP I+TLGEYEA  N 
Sbjct: 430 ELNESTFRVDPDEVLAVNFMLQLYNLLDETPVSVNAALRLAKSLNPKIMTLGEYEACLNE 489

Query: 32  VEFLPRFKNA 3
           V+F+ RFKNA
Sbjct: 490 VDFINRFKNA 499


>emb|CAN74537.1| hypothetical protein VITISV_023717 [Vitis vinifera]
          Length = 893

 Score =  199 bits (507), Expect = 1e-49
 Identities = 99/130 (76%), Positives = 116/130 (89%)
 Frame = -1

Query: 392 QALATRTAGKPSKIRISGIPAPALGKSPAASLYATGNRLREFAKVLDLNFEFEPVLTPFQ 213
           QALATR+AGKP++IRISGIPAPALGKSPA+SL+ATGNRLR+FA++LDLNFEFEP+LTP Q
Sbjct: 403 QALATRSAGKPARIRISGIPAPALGKSPASSLFATGNRLRDFARLLDLNFEFEPILTPIQ 462

Query: 212 EFDGSSFRVDLDEALAVNFMLQLYNLLDESNDGIEAALKLAKSLNPIIVTLGEYEASFNR 33
           E + S+FRVD DE LAVNFMLQLYNLLDE+   + AAL+LAKSLNP I+TLGEYEA  N 
Sbjct: 463 ELNESTFRVDPDEVLAVNFMLQLYNLLDETPVSVNAALRLAKSLNPKIMTLGEYEACLNE 522

Query: 32  VEFLPRFKNA 3
           V+F+ RFKNA
Sbjct: 523 VDFINRFKNA 532


>ref|XP_002310226.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222853129|gb|EEE90676.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 514

 Score =  194 bits (493), Expect = 6e-48
 Identities = 99/130 (76%), Positives = 111/130 (85%)
 Frame = -1

Query: 392 QALATRTAGKPSKIRISGIPAPALGKSPAASLYATGNRLREFAKVLDLNFEFEPVLTPFQ 213
           QALATR+AGKP +IRISGIPAP LGK+PAASL ATGNRL ++AK+L LNFEFEP+LTP Q
Sbjct: 348 QALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNRLLDYAKLLGLNFEFEPILTPIQ 407

Query: 212 EFDGSSFRVDLDEALAVNFMLQLYNLLDESNDGIEAALKLAKSLNPIIVTLGEYEASFNR 33
           E + S FR + DE LAVNFMLQLYNLLDES   +E ALK+AKSLNPIIVTLGEYEAS NR
Sbjct: 408 ELNESCFRAEPDEVLAVNFMLQLYNLLDESPVAVETALKMAKSLNPIIVTLGEYEASLNR 467

Query: 32  VEFLPRFKNA 3
           V +L RFKNA
Sbjct: 468 VGYLTRFKNA 477


>ref|XP_002327806.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222836891|gb|EEE75284.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 589

 Score =  192 bits (488), Expect = 2e-47
 Identities = 98/130 (75%), Positives = 110/130 (84%)
 Frame = -1

Query: 392 QALATRTAGKPSKIRISGIPAPALGKSPAASLYATGNRLREFAKVLDLNFEFEPVLTPFQ 213
           QALATR+AGKP +IRISGIPAP LGK+PAASL ATGNRL +FAK+LDLNFEFEP+LTP Q
Sbjct: 345 QALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNRLLDFAKLLDLNFEFEPILTPIQ 404

Query: 212 EFDGSSFRVDLDEALAVNFMLQLYNLLDESNDGIEAALKLAKSLNPIIVTLGEYEASFNR 33
           E + S FRV+ DE LAVNFMLQLYNLL E+   +E ALK+AKSLNP IVTLGEYE S NR
Sbjct: 405 ELNESCFRVEPDEVLAVNFMLQLYNLLGETPGAVETALKMAKSLNPRIVTLGEYEVSLNR 464

Query: 32  VEFLPRFKNA 3
           V +L RFKNA
Sbjct: 465 VGYLTRFKNA 474


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