BLASTX nr result

ID: Panax21_contig00036313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036313
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39619.3| unnamed protein product [Vitis vinifera]              572   e-161
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   572   e-161
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   538   e-151
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   530   e-148

>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  572 bits (1473), Expect = e-161
 Identities = 267/330 (80%), Positives = 301/330 (91%)
 Frame = +3

Query: 3    DMYMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEI 182
            DMYMKCGCVENALEVFNGMEE+GVSSWNALI+GLA+NGLVE SL+MFS+MK  GV  NEI
Sbjct: 311  DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 370

Query: 183  TFVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIES 362
            TF+ VLGACRHMGLV+EGR HF  MI+KH I PNVKHYGCMVDLLGRAGLL EAE+LIES
Sbjct: 371  TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 430

Query: 363  MPMVPDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHDGFHVLLSNIYASKGNWDDV 542
            MPM PDVATWGALLGACKKHGD EMGERVGRKLIELQPDHDGFHVLLSNI+ASKG+W+DV
Sbjct: 431  MPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDV 490

Query: 543  ADIRGMMTQHGMVKTPGCSTIEAAGIVHEFLAGDRTHPKINEIEEMLNEMAKRLKLMGYS 722
             ++RGMM Q G+VKTPGCS IEA G+VHEFLAGD+THP IN++E MLNEMAKRLK+ GY+
Sbjct: 491  LEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYA 550

Query: 723  PDTNEVSFDIDEEDKETTVFRHSEKLAIAFGLIATSPPAPIRIMKNLRICNDCHAAARLI 902
            PDTNEVS DIDEE+KETT+FRHSEKLAIAFGL+  SPP PIRIMKNLRICNDCH AA+LI
Sbjct: 551  PDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLI 610

Query: 903  ARAFNREIIIRDRHRFHHFKQGSCSCKEYW 992
            ++A+ REI++RDRHRFH+FK+G+CSC +YW
Sbjct: 611  SKAYAREIVVRDRHRFHYFKEGACSCMDYW 640



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
 Frame = +3

Query: 21  GCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEITFVAVL 200
           G V  A ++FN M+E+ + SW+ALI G   NG+ E +L MF +M   G+ L+E+  V+VL
Sbjct: 212 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVL 271

Query: 201 GACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMV----DLLGRAGLLKEAEELIESMP 368
            AC H+ +V+ G K    ++ +  I   V     ++    D+  + G ++ A E+   M 
Sbjct: 272 SACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGME 330

Query: 369 MVPDVATWGALL 404
               V++W AL+
Sbjct: 331 -EKGVSSWNALI 341


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 808

 Score =  572 bits (1473), Expect = e-161
 Identities = 267/330 (80%), Positives = 301/330 (91%)
 Frame = +3

Query: 3    DMYMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEI 182
            DMYMKCGCVENALEVFNGMEE+GVSSWNALI+GLA+NGLVE SL+MFS+MK  GV  NEI
Sbjct: 479  DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 538

Query: 183  TFVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIES 362
            TF+ VLGACRHMGLV+EGR HF  MI+KH I PNVKHYGCMVDLLGRAGLL EAE+LIES
Sbjct: 539  TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 598

Query: 363  MPMVPDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHDGFHVLLSNIYASKGNWDDV 542
            MPM PDVATWGALLGACKKHGD EMGERVGRKLIELQPDHDGFHVLLSNI+ASKG+W+DV
Sbjct: 599  MPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDV 658

Query: 543  ADIRGMMTQHGMVKTPGCSTIEAAGIVHEFLAGDRTHPKINEIEEMLNEMAKRLKLMGYS 722
             ++RGMM Q G+VKTPGCS IEA G+VHEFLAGD+THP IN++E MLNEMAKRLK+ GY+
Sbjct: 659  LEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYA 718

Query: 723  PDTNEVSFDIDEEDKETTVFRHSEKLAIAFGLIATSPPAPIRIMKNLRICNDCHAAARLI 902
            PDTNEVS DIDEE+KETT+FRHSEKLAIAFGL+  SPP PIRIMKNLRICNDCH AA+LI
Sbjct: 719  PDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLI 778

Query: 903  ARAFNREIIIRDRHRFHHFKQGSCSCKEYW 992
            ++A+ REI++RDRHRFH+FK+G+CSC +YW
Sbjct: 779  SKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 48/157 (30%), Positives = 83/157 (52%)
 Frame = +3

Query: 15  KCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEITFVA 194
           K G V  A ++FN M+E+ + SW+ALI G   NG+ E +L MF +M   G+ L+E+  V+
Sbjct: 250 KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVS 309

Query: 195 VLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIESMPMV 374
           VL AC H+ +V+ G K    ++ +  I   V     ++ +   +G + +A++L      +
Sbjct: 310 VLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNL 368

Query: 375 PDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHD 485
            D  +W +++  C K G  E      R L ++ P+ D
Sbjct: 369 -DQISWNSMISGCMKCGSVEK----ARALFDVMPEKD 400



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 40/131 (30%), Positives = 72/131 (54%)
 Frame = +3

Query: 12  MKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEITFV 191
           MKCG VE A  +F+ M E+ + SW+A+I G A +     +L +F +M+   +  +E   V
Sbjct: 381 MKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILV 440

Query: 192 AVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIESMPM 371
           +V+ AC H+  +++G K     I+K+ +  NV     ++D+  + G ++ A E+   M  
Sbjct: 441 SVISACTHLAALDQG-KWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME- 498

Query: 372 VPDVATWGALL 404
              V++W AL+
Sbjct: 499 EKGVSSWNALI 509


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score =  560 bits (1442), Expect = e-157
 Identities = 261/330 (79%), Positives = 298/330 (90%)
 Frame = +3

Query: 3    DMYMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEI 182
            +MYMK GCVE+ALEVF G+EE+GVS+WNALILGLAMNGLV+ SL+ FS+MK+ GV  NEI
Sbjct: 464  NMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEI 523

Query: 183  TFVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIES 362
            TFVAVLGACRHMGLV+EG +HF+ MIQ+H I PN+KHYGCMVDLLGRAG+LKEAEELIES
Sbjct: 524  TFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIES 583

Query: 363  MPMVPDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHDGFHVLLSNIYASKGNWDDV 542
            MPM PDV+TWGALLGACKK+GDNE GER+GRKL+EL PDHDGF+VLLSNIYASKGNW DV
Sbjct: 584  MPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDV 643

Query: 543  ADIRGMMTQHGMVKTPGCSTIEAAGIVHEFLAGDRTHPKINEIEEMLNEMAKRLKLMGYS 722
             ++RGMM QHG+VKTPGCS IEA G VHEFLAGD+THP+   IE ML+EMAK+LKL GY+
Sbjct: 644  LEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYA 703

Query: 723  PDTNEVSFDIDEEDKETTVFRHSEKLAIAFGLIATSPPAPIRIMKNLRICNDCHAAARLI 902
            PDT EVS DIDEE+KETT+FRHSEKLAIAFGLIA  PP PIRI+KNLRICNDCH AA+LI
Sbjct: 704  PDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLI 763

Query: 903  ARAFNREIIIRDRHRFHHFKQGSCSCKEYW 992
            ++AFNREI++RDRHRFHHFKQGSCSC +YW
Sbjct: 764  SKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 37/132 (28%), Positives = 74/132 (56%)
 Frame = +3

Query: 9   YMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEITF 188
           Y+KCG +E A  +F+ M ++   SW+A+I G A       +L +F +M+  G + +E   
Sbjct: 365 YVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETIL 424

Query: 189 VAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIESMP 368
           V+V+ AC H+  +++G K     I+K+ +  N+     ++++  + G +++A E+ + + 
Sbjct: 425 VSVISACTHLAALDQG-KWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483

Query: 369 MVPDVATWGALL 404
               V+TW AL+
Sbjct: 484 -EKGVSTWNALI 494



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 43/160 (26%), Positives = 78/160 (48%)
 Frame = +3

Query: 6   MYMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEIT 185
           ++ K G VE A ++FN M+++ + SW+ALI     N + E +L +F +M   G+ ++E+ 
Sbjct: 232 LFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVV 291

Query: 186 FVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIESM 365
            ++VL AC  + +V  G K    ++ K  I   V     ++ +      +  A++L  S 
Sbjct: 292 VLSVLSACSRLLVVITG-KLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLF-SE 349

Query: 366 PMVPDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHD 485
               D  +W +++    K G+ E      R L +  PD D
Sbjct: 350 SCCLDQISWNSMISGYVKCGEIEK----ARALFDSMPDKD 385


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 775

 Score =  538 bits (1386), Expect = e-151
 Identities = 248/330 (75%), Positives = 288/330 (87%)
 Frame = +3

Query: 3    DMYMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEI 182
            DMYMKCGCVENALEVF  MEE+GVS+WNA+ILGLAMNG VE SL MF+DMKK G   NEI
Sbjct: 446  DMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEI 505

Query: 183  TFVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIES 362
            TF+ VLGACRHMGLV +GR +F+ MI +H I  N+KHYGCMVDLLGRAGLLKEAEELI+S
Sbjct: 506  TFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDS 565

Query: 363  MPMVPDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHDGFHVLLSNIYASKGNWDDV 542
            MPM PDVATWGALLGAC+KH DNEMGER+GRKLI+LQPDHDGFHVLLSNIYASKGNW +V
Sbjct: 566  MPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNV 625

Query: 543  ADIRGMMTQHGMVKTPGCSTIEAAGIVHEFLAGDRTHPKINEIEEMLNEMAKRLKLMGYS 722
             +IRG+M QHG+VKTPGCS IEA G VHEFLAGD+THP+IN+IE ML+ +A +LK+ GY 
Sbjct: 626  LEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYV 685

Query: 723  PDTNEVSFDIDEEDKETTVFRHSEKLAIAFGLIATSPPAPIRIMKNLRICNDCHAAARLI 902
            P T+EVS DIDEE+KET +FRHSEKLA+AFGLI  SPP PIR+ KNLRICNDCH   +LI
Sbjct: 686  PTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLI 745

Query: 903  ARAFNREIIIRDRHRFHHFKQGSCSCKEYW 992
            ++AF+R+I++RDRHRFHHFK G+CSC ++W
Sbjct: 746  SKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 40/142 (28%), Positives = 75/142 (52%)
 Frame = +3

Query: 9   YMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEITF 188
           Y++CG +++A  +F  M E+ V SW+A+I G A +     +L +F +M+  GV  +E   
Sbjct: 347 YLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETAL 406

Query: 189 VAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIESMP 368
           V+ + AC H+  ++ G K     I ++ +  NV     ++D+  + G ++ A E+  +M 
Sbjct: 407 VSAISACTHLATLDLG-KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME 465

Query: 369 MVPDVATWGALLGACKKHGDNE 434
               V+TW A++     +G  E
Sbjct: 466 -EKGVSTWNAVILGLAMNGSVE 486



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
 Frame = +3

Query: 6   MYMKCGCVENALEVFNGME--ERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNE 179
           ++ + GCVE A  +FNG+   ER + SW+A++     N + E +L +F +MK  GV ++E
Sbjct: 211 LFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDE 270

Query: 180 ITFVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIE 359
           +  V+ L AC  +  VE GR      + K  +   V     ++ L    G + +A  + +
Sbjct: 271 VVVVSALSACSRVLNVEMGRWVHGLAV-KVGVEDYVSLKNALIHLYSSCGEIVDARRIFD 329

Query: 360 SMPMVPDVATWGALLGA---CKKHGDNEM 437
               + D+ +W +++     C    D EM
Sbjct: 330 DGGELLDLISWNSMISGYLRCGSIQDAEM 358


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 953

 Score =  530 bits (1365), Expect = e-148
 Identities = 250/322 (77%), Positives = 284/322 (88%)
 Frame = +3

Query: 3    DMYMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEI 182
            DMYMKCGCVE ALEVF GM E+G+S+WNALILGLAMNGLVESSL+MFS+MKKC V  NEI
Sbjct: 551  DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 610

Query: 183  TFVAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIES 362
            TF+ VLGACRHMGLV+EG+ HF  MI  H I PNVKHYGCMVDLLGRAG L+EAEEL+  
Sbjct: 611  TFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNR 670

Query: 363  MPMVPDVATWGALLGACKKHGDNEMGERVGRKLIELQPDHDGFHVLLSNIYASKGNWDDV 542
            MPM PDVATWGALLGACKKHGD+EMG RVGRKLIELQPDHDGFHVLLSNIYASKG WDDV
Sbjct: 671  MPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 730

Query: 543  ADIRGMMTQHGMVKTPGCSTIEAAGIVHEFLAGDRTHPKINEIEEMLNEMAKRLKLMGYS 722
             +IRGMMT+H ++K PGCS IEA G++HEFLAGD+THP ++ IE+ML EMA +LKL GY+
Sbjct: 731  LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYT 790

Query: 723  PDTNEVSFDIDEEDKETTVFRHSEKLAIAFGLIATSPPAPIRIMKNLRICNDCHAAARLI 902
            PD NEV  D+DEE+KE+T+FRHSEKLAIAFGLI  SPP PIRIMKNLRICNDCH AA+LI
Sbjct: 791  PDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLI 850

Query: 903  ARAFNREIIIRDRHRFHHFKQG 968
            ++AF R+I++RDRHRFHHF+QG
Sbjct: 851  SKAFCRKIVVRDRHRFHHFEQG 872



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 42/132 (31%), Positives = 77/132 (58%)
 Frame = +3

Query: 9   YMKCGCVENALEVFNGMEERGVSSWNALILGLAMNGLVESSLEMFSDMKKCGVELNEITF 188
           Y+KC  V+NA  +F+ M E+ V SW+++I G A N L + +L +F +M+  G + +E T 
Sbjct: 452 YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTL 511

Query: 189 VAVLGACRHMGLVEEGRKHFDCMIQKHNIAPNVKHYGCMVDLLGRAGLLKEAEELIESMP 368
           V+V+ AC  +  +E+G K     I+++ +  NV     ++D+  + G ++ A E+   M 
Sbjct: 512 VSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM- 569

Query: 369 MVPDVATWGALL 404
           +   ++TW AL+
Sbjct: 570 IEKGISTWNALI 581


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