BLASTX nr result

ID: Panax21_contig00036310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036310
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37538.3| unnamed protein product [Vitis vinifera]              272   2e-71
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   272   2e-71
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]   272   2e-71
ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   268   5e-70
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   262   2e-68

>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  272 bits (695), Expect = 2e-71
 Identities = 130/168 (77%), Positives = 148/168 (88%)
 Frame = -3

Query: 506 AIRQVINCIWKHPGAPVVYLTCDMLGQEEILVNVSQTFGSKIFIDKESNPDCYQALKFTV 327
           AI+QVINCIWKHP AP+VYL  DMLGQEEIL+NVS+ FGSKIF+DK +NP+C+QAL   V
Sbjct: 200 AIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMV 259

Query: 326 PEILSEDSSSRFHVFDGFPKLSERAEAKLAEARNNSQPEPLIIRPSAQWYAFDEGSSETE 147
           PEILS+D SSRF VF+GFPKL ERA+AKLAEA+ NS PEPLIIRPSAQWYA +E   +TE
Sbjct: 260 PEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTE 319

Query: 146 IRRKERFNEAVRDQFGIWHVCYSMHSSREELDWALQLLAPKWVVSTTP 3
            R+KE FNEAVRDQFGIWHVCYS+HSSR+EL+WALQLLAPK VVSTTP
Sbjct: 320 RRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTP 367


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  272 bits (695), Expect = 2e-71
 Identities = 130/168 (77%), Positives = 148/168 (88%)
 Frame = -3

Query: 506 AIRQVINCIWKHPGAPVVYLTCDMLGQEEILVNVSQTFGSKIFIDKESNPDCYQALKFTV 327
           AI+QVINCIWKHP AP+VYL  DMLGQEEIL+NVS+ FGSKIF+DK +NP+C+QAL   V
Sbjct: 166 AIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMV 225

Query: 326 PEILSEDSSSRFHVFDGFPKLSERAEAKLAEARNNSQPEPLIIRPSAQWYAFDEGSSETE 147
           PEILS+D SSRF VF+GFPKL ERA+AKLAEA+ NS PEPLIIRPSAQWYA +E   +TE
Sbjct: 226 PEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTE 285

Query: 146 IRRKERFNEAVRDQFGIWHVCYSMHSSREELDWALQLLAPKWVVSTTP 3
            R+KE FNEAVRDQFGIWHVCYS+HSSR+EL+WALQLLAPK VVSTTP
Sbjct: 286 RRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTP 333


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score =  272 bits (695), Expect = 2e-71
 Identities = 130/168 (77%), Positives = 148/168 (88%)
 Frame = -3

Query: 506  AIRQVINCIWKHPGAPVVYLTCDMLGQEEILVNVSQTFGSKIFIDKESNPDCYQALKFTV 327
            AI+QVINCIWKHP AP+VYL  DMLGQEEIL+NVS+ FGSKIF+DK +NP+C+QAL   V
Sbjct: 680  AIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMV 739

Query: 326  PEILSEDSSSRFHVFDGFPKLSERAEAKLAEARNNSQPEPLIIRPSAQWYAFDEGSSETE 147
            PEILS+D SSRF VF+GFPKL ERA+AKLAEA+ NS PEPLIIRPSAQWYA +E   +TE
Sbjct: 740  PEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTE 799

Query: 146  IRRKERFNEAVRDQFGIWHVCYSMHSSREELDWALQLLAPKWVVSTTP 3
             R+KE FNEAVRDQFGIWHVCYS+HSSR+EL+WALQLLAPK VVSTTP
Sbjct: 800  RRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTP 847


>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223530792|gb|EEF32657.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  268 bits (684), Expect = 5e-70
 Identities = 125/168 (74%), Positives = 146/168 (86%)
 Frame = -3

Query: 506 AIRQVINCIWKHPGAPVVYLTCDMLGQEEILVNVSQTFGSKIFIDKESNPDCYQALKFTV 327
           A +QVINCIWKHP A +VYLTCD+LGQEE+L NVS+TFGSKI+++K +NP+C+ AL  TV
Sbjct: 166 ASQQVINCIWKHPAAAIVYLTCDLLGQEELLANVSRTFGSKIYVEKAANPECFHALTLTV 225

Query: 326 PEILSEDSSSRFHVFDGFPKLSERAEAKLAEARNNSQPEPLIIRPSAQWYAFDEGSSETE 147
           P+IL++D SSRFHVF+GFP L ERA AK+AEA+ + QPEPLIIRPSAQWYA +E  S TE
Sbjct: 226 PQILTQDPSSRFHVFNGFPMLYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTE 285

Query: 146 IRRKERFNEAVRDQFGIWHVCYSMHSSREELDWALQLLAPKWVVSTTP 3
            RRK R +EAVRDQFGIWHVCYSMHSSREEL+W LQLLAPKWVVSTTP
Sbjct: 286 SRRKLRLSEAVRDQFGIWHVCYSMHSSREELEWFLQLLAPKWVVSTTP 333


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  262 bits (670), Expect = 2e-68
 Identities = 123/168 (73%), Positives = 144/168 (85%)
 Frame = -3

Query: 506 AIRQVINCIWKHPGAPVVYLTCDMLGQEEILVNVSQTFGSKIFIDKESNPDCYQALKFTV 327
           AI+QV+NCIWKHP A VVYLTCD+LGQE++L  VS+TFGSKIF+D+ +N + ++AL  TV
Sbjct: 166 AIQQVLNCIWKHPAATVVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRALTLTV 225

Query: 326 PEILSEDSSSRFHVFDGFPKLSERAEAKLAEARNNSQPEPLIIRPSAQWYAFDEGSSETE 147
           PEIL++D SSRFH+FDGFPKL ERA  K+AEA+ N QPEPLIIRPSAQWYA +EG SETE
Sbjct: 226 PEILTQDPSSRFHMFDGFPKLYERAAKKIAEAQANLQPEPLIIRPSAQWYACEEGYSETE 285

Query: 146 IRRKERFNEAVRDQFGIWHVCYSMHSSREELDWALQLLAPKWVVSTTP 3
            +RK RFNEAVRD   +WHVCYSMHSSR EL+WALQLL PKWVVSTTP
Sbjct: 286 SQRKLRFNEAVRDPNSVWHVCYSMHSSRGELEWALQLLVPKWVVSTTP 333


Top