BLASTX nr result

ID: Panax21_contig00036301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036301
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   254   1e-65
ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   250   2e-64
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   250   2e-64
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   248   5e-64
ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-42

>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  254 bits (649), Expect = 1e-65
 Identities = 118/186 (63%), Positives = 154/186 (82%)
 Frame = +1

Query: 1   VISALALHGYGSASLNFYNDMRDNHEKPDDVTFIALLNACSHAGLVKEGCKFFSCMERDY 180
           +IS LALHG+G A+LN +N MR NH +PDD+TFI LL+ACSH+GLV+EG + F  M++++
Sbjct: 316 LISGLALHGHGYAALNIFNKMRKNHTRPDDITFIGLLSACSHSGLVQEGSQLFYSMQKEF 375

Query: 181 GVIPKMEHYGCIVDLLGRAGFLESALRLIDSMPFEPGKTVLGALLSACVNYGDLEIGEKV 360
           G+ PK+EHYGC+VDLL RA  L+ AL+LI +MPF+PG+ +LGALLSAC+ + DLE+GE+V
Sbjct: 376 GISPKIEHYGCMVDLLSRARHLDCALQLIKTMPFKPGEAILGALLSACIVHQDLEVGERV 435

Query: 361 VKLVSERNDHLSDGEYMMVANLYALCNQWEKANRWREMMNDSTEVAKTAGVSVFEMNGRV 540
           VKLVS R ++LSDGE MM +NLYA C QWE+AN+WREMMND T + KTAG SV E+NG+ 
Sbjct: 436 VKLVSSRGNYLSDGELMMFSNLYASCGQWEEANKWREMMND-TGIVKTAGFSVVEVNGKF 494

Query: 541 YKFLAG 558
           +KFLAG
Sbjct: 495 HKFLAG 500


>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  250 bits (638), Expect = 2e-64
 Identities = 113/186 (60%), Positives = 150/186 (80%)
 Frame = +1

Query: 1   VISALALHGYGSASLNFYNDMRDNHEKPDDVTFIALLNACSHAGLVKEGCKFFSCMERDY 180
           +IS LALHGYG A++   + MRDN  +PD++TFI LL+ACSH  LV+EGC+ F CME+++
Sbjct: 320 IISGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGLLSACSHRSLVQEGCRLFDCMEKEF 379

Query: 181 GVIPKMEHYGCIVDLLGRAGFLESALRLIDSMPFEPGKTVLGALLSACVNYGDLEIGEKV 360
           G+ PK+EHYGC+VDLLGRAGFL+ A +LI +MPFEPG+++LGALL ACV + DLE GEKV
Sbjct: 380 GLPPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKV 439

Query: 361 VKLVSERNDHLSDGEYMMVANLYALCNQWEKANRWREMMNDSTEVAKTAGVSVFEMNGRV 540
           + L++ +  H+SDGE+MM  NLYA C QW++ANRWRE MN+S  +AKTAG S  E++G+ 
Sbjct: 440 INLITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNES-GIAKTAGGSTIEVDGKF 498

Query: 541 YKFLAG 558
           Y+FLAG
Sbjct: 499 YRFLAG 504


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  250 bits (638), Expect = 2e-64
 Identities = 113/186 (60%), Positives = 150/186 (80%)
 Frame = +1

Query: 1    VISALALHGYGSASLNFYNDMRDNHEKPDDVTFIALLNACSHAGLVKEGCKFFSCMERDY 180
            +IS LALHGYG A++   + MRDN  +PD++TFI LL+ACSH  LV+EGC+ F CME+++
Sbjct: 1105 IISGLALHGYGHAAVKLLDKMRDNGIRPDEITFIGLLSACSHGSLVQEGCRLFDCMEKEF 1164

Query: 181  GVIPKMEHYGCIVDLLGRAGFLESALRLIDSMPFEPGKTVLGALLSACVNYGDLEIGEKV 360
            G+ PK+EHYGC+VDLLGRAGFL+ A +LI +MPFEPG+++LGALL ACV + DLE GEKV
Sbjct: 1165 GLPPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKV 1224

Query: 361  VKLVSERNDHLSDGEYMMVANLYALCNQWEKANRWREMMNDSTEVAKTAGVSVFEMNGRV 540
            + L++ +  H+SDGE+MM  NLYA C QW++ANRWRE MN+S  +AKTAG S  E++G+ 
Sbjct: 1225 IBLITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNES-GIAKTAGGSTIEVDGKF 1283

Query: 541  YKFLAG 558
            Y+FLAG
Sbjct: 1284 YRFLAG 1289


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  248 bits (634), Expect = 5e-64
 Identities = 115/186 (61%), Positives = 151/186 (81%)
 Frame = +1

Query: 1   VISALALHGYGSASLNFYNDMRDNHEKPDDVTFIALLNACSHAGLVKEGCKFFSCMERDY 180
           +ISALALHG+G A+L  +  MR NH +PDD+TFI ++NACSH+GLV+EGC+ F  M+ D+
Sbjct: 316 LISALALHGHGYAALKVFGKMRKNHIQPDDITFIGIINACSHSGLVQEGCQLFVSMQEDF 375

Query: 181 GVIPKMEHYGCIVDLLGRAGFLESALRLIDSMPFEPGKTVLGALLSACVNYGDLEIGEKV 360
           G+ PK+EHYGC+V+LLGR+G L  AL++I++MPFEPG+++LGALLSAC+ Y DLE GE+V
Sbjct: 376 GISPKLEHYGCMVNLLGRSGHLALALQVIETMPFEPGESILGALLSACIIYQDLETGERV 435

Query: 361 VKLVSERNDHLSDGEYMMVANLYALCNQWEKANRWREMMNDSTEVAKTAGVSVFEMNGRV 540
           ++LV  +  +LSDGE MM +NLYA C  WE+ANRWREMMN ST + KTAG SV E++GR 
Sbjct: 436 IELVCSKAHYLSDGELMMFSNLYASCGNWEEANRWREMMN-STGIVKTAGYSVIEVSGRF 494

Query: 541 YKFLAG 558
            KFLAG
Sbjct: 495 QKFLAG 500


>ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|222839060|gb|EEE77411.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  176 bits (447), Expect = 3e-42
 Identities = 86/186 (46%), Positives = 126/186 (67%)
 Frame = +1

Query: 1   VISALALHGYGSASLNFYNDMRDNHEKPDDVTFIALLNACSHAGLVKEGCKFFSCMERDY 180
           +I  LA+HG G A++  + +M      PDD+TF+ LL AC+H+GLV+EG  +FS M R Y
Sbjct: 329 MIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVY 388

Query: 181 GVIPKMEHYGCIVDLLGRAGFLESALRLIDSMPFEPGKTVLGALLSACVNYGDLEIGEKV 360
           G+ P+MEH+GC+VDLLGRAG +  A +LID MP  P  TVLG LL AC  + ++E+GE++
Sbjct: 389 GIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEI 448

Query: 361 VKLVSERNDHLSDGEYMMVANLYALCNQWEKANRWREMMNDSTEVAKTAGVSVFEMNGRV 540
            + V E   + + G Y+++ANLYA   +WE A + R++M+D   V K  G S+ E+ G V
Sbjct: 449 GRRVIELEPN-NSGRYVLLANLYANAGKWEDAAKVRKLMDD-RGVKKAPGFSMIELQGTV 506

Query: 541 YKFLAG 558
           ++F+AG
Sbjct: 507 HEFIAG 512


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