BLASTX nr result

ID: Panax21_contig00036298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036298
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27010.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-118
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]   431   e-118
ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116

>emb|CBI27010.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  431 bits (1108), Expect = e-118
 Identities = 206/280 (73%), Positives = 232/280 (82%)
 Frame = +3

Query: 3   VVAWTAMINGCLLYGDVVSARRLFDLAPERDIVLWNTMVSGYIKCGDMAAARKLFDVMPN 182
           VVAWT+MING +L  D+VSARRLFDLAPERD+VLWN MVSGYI+ GDM  ARKLF  MPN
Sbjct: 44  VVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPN 103

Query: 183 RDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRM 362
           RD+M WNT+L GYA N +VE  E LFEEMPERNIFSWN LIGG AHNG F EVLG+FKRM
Sbjct: 104 RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 163

Query: 363 LNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGM 542
           L+ES V PNDATLVTVLSAC+RLGALDLGKWVHV+ ES+  K N+YVGN L+DMYAKCG+
Sbjct: 164 LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGI 223

Query: 543 IESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDALRFFDEMKNVGEKPDGITFIGIFCA 722
           IE+AI VF+ M  KDLISWNTLI GLA+H  G DAL  F +MKN G+KPDGITFIGI CA
Sbjct: 224 IENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 283

Query: 723 CSHMGRVEDGLKYFHSMINRYFIIPQIEHYGCVVDLLGRA 842
           C+HMG VEDG  YF SM + Y I+PQIEHYGC+VD+L RA
Sbjct: 284 CTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARA 323



 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
 Frame = +3

Query: 144 MAAARKLFDVMPNRDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFSWNGLIGG*AHN 323
           M  AR+LFD +P+ ++  WN++  GYA +   E   ++F EM ERN+ +W  +I     N
Sbjct: 1   MTYARQLFDQIPDPNIALWNSMFRGYAQS---ESYREIFCEMFERNVVAWTSMI-----N 52

Query: 324 GCFLEV-LGAFKRMLNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFVESTEYKENIY 500
           G  L   L + +R+ +   + P    ++  +     +   D+ +   +F E      ++ 
Sbjct: 53  GYILSADLVSARRLFD---LAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMP--NRDVM 107

Query: 501 VGNGLIDMYAKCGMIESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDALRFFDEMKNVG 680
             N ++  YA  G +E+   +F+ M  +++ SWN LI G A +G   + L  F  M +  
Sbjct: 108 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 167

Query: 681 E-KPDGITFIGIFCACSHMGRVEDGLKYFH 767
           +  P+  T + +  AC+ +G ++ G K+ H
Sbjct: 168 DVPPNDATLVTVLSACARLGALDLG-KWVH 196


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 623

 Score =  431 bits (1108), Expect = e-118
 Identities = 206/280 (73%), Positives = 232/280 (82%)
 Frame = +3

Query: 3    VVAWTAMINGCLLYGDVVSARRLFDLAPERDIVLWNTMVSGYIKCGDMAAARKLFDVMPN 182
            VVAWT+MING +L  D+VSARRLFDLAPERD+VLWN MVSGYI+ GDM  ARKLF  MPN
Sbjct: 202  VVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPN 261

Query: 183  RDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRM 362
            RD+M WNT+L GYA N +VE  E LFEEMPERNIFSWN LIGG AHNG F EVLG+FKRM
Sbjct: 262  RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 321

Query: 363  LNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGM 542
            L+ES V PNDATLVTVLSAC+RLGALDLGKWVHV+ ES+  K N+YVGN L+DMYAKCG+
Sbjct: 322  LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGI 381

Query: 543  IESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDALRFFDEMKNVGEKPDGITFIGIFCA 722
            IE+AI VF+ M  KDLISWNTLI GLA+H  G DAL  F +MKN G+KPDGITFIGI CA
Sbjct: 382  IENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 441

Query: 723  CSHMGRVEDGLKYFHSMINRYFIIPQIEHYGCVVDLLGRA 842
            C+HMG VEDG  YF SM + Y I+PQIEHYGC+VD+L RA
Sbjct: 442  CTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARA 481



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 53/177 (29%), Positives = 91/177 (51%)
 Frame = +3

Query: 252 KLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRMLNESSVQPNDATLVTVLSACSRL 431
           +LF+++P+ NI  WN +  G A +  + EV+  F +M     ++PN  T   VL +C ++
Sbjct: 91  QLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKG-MDIRPNCFTFPVVLKSCGKI 149

Query: 432 GALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGMIESAIDVFQNMSAKDLISWNTLI 611
            AL  G+ VH F+    ++ N +VG  LIDMY+  G +  A  +F  M  +++++W ++I
Sbjct: 150 NALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMI 209

Query: 612 NGLAVHGHGTDALRFFDEMKNVGEKPDGITFIGIFCACSHMGRVEDGLKYFHSMINR 782
           NG  +      A R FD    +  + D + +  +       G + +  K FH M NR
Sbjct: 210 NGYILSADLVSARRLFD----LAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR 262


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score =  431 bits (1108), Expect = e-118
 Identities = 206/280 (73%), Positives = 232/280 (82%)
 Frame = +3

Query: 3    VVAWTAMINGCLLYGDVVSARRLFDLAPERDIVLWNTMVSGYIKCGDMAAARKLFDVMPN 182
            VVAWT+MING +L  D+VSARRLFDLAPERD+VLWN MVSGYI+ GDM  ARKLF  MPN
Sbjct: 265  VVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPN 324

Query: 183  RDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRM 362
            RD+M WNT+L GYA N +VE  E LFEEMPERNIFSWN LIGG AHNG F EVLG+FKRM
Sbjct: 325  RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 384

Query: 363  LNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGM 542
            L+ES V PNDATLVTVLSAC+RLGALDLGKWVHV+ ES+  K N+YVGN L+DMYAKCG+
Sbjct: 385  LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGI 444

Query: 543  IESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDALRFFDEMKNVGEKPDGITFIGIFCA 722
            IE+AI VF+ M  KDLISWNTLI GLA+H  G DAL  F +MKN G+KPDGITFIGI CA
Sbjct: 445  IENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 504

Query: 723  CSHMGRVEDGLKYFHSMINRYFIIPQIEHYGCVVDLLGRA 842
            C+HMG VEDG  YF SM + Y I+PQIEHYGC+VD+L RA
Sbjct: 505  CTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARA 544



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 45/137 (32%), Positives = 76/137 (55%)
 Frame = +3

Query: 252 KLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRMLNESSVQPNDATLVTVLSACSRL 431
           +LF+++P+ NI  WN +  G A +  + EV+  F +M     ++PN  T   VL +C ++
Sbjct: 154 QLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKG-MDIRPNCFTFPVVLKSCGKI 212

Query: 432 GALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGMIESAIDVFQNMSAKDLISWNTLI 611
            AL  G+ VH F+    ++ N +VG  LIDMY+  G +  A  +F  M  +++++W ++I
Sbjct: 213 NALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMI 272

Query: 612 NGLAVHGHGTDALRFFD 662
           NG  +      A R FD
Sbjct: 273 NGYILSADLVSARRLFD 289


>ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|222851282|gb|EEE88829.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  429 bits (1102), Expect = e-118
 Identities = 200/280 (71%), Positives = 233/280 (83%)
 Frame = +3

Query: 3   VVAWTAMINGCLLYGDVVSARRLFDLAPERDIVLWNTMVSGYIKCGDMAAARKLFDVMPN 182
           V+AWTAMING +   D+V+ARRLFDLAPERDIVLWNTM+SGYI+  D+  AR+LFD MPN
Sbjct: 117 VIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPN 176

Query: 183 RDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRM 362
           +D+MSWNT+L+GYA+N DV  CE+LFEEMPERN+FSWN LIGG   NGCF EVL AFKRM
Sbjct: 177 KDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRM 236

Query: 363 LNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGM 542
           L + +V PNDATLV VLSAC+RLGALDLGKWVHV+ ES  YK N+YV N L+DMYAKCG+
Sbjct: 237 LVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGV 296

Query: 543 IESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDALRFFDEMKNVGEKPDGITFIGIFCA 722
           +E+A+DVF++M  KDLISWNT+I GLAVHGHG DAL  F  MK  GE PDGITFIGI CA
Sbjct: 297 VETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCA 356

Query: 723 CSHMGRVEDGLKYFHSMINRYFIIPQIEHYGCVVDLLGRA 842
           C+HMG VEDG  YF SM + Y I+P+IEHYGC+VDLLGRA
Sbjct: 357 CTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRA 396



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 49/142 (34%), Positives = 75/142 (52%)
 Frame = +3

Query: 237 VEGCEKLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRMLNESSVQPNDATLVTVLS 416
           +E   K+F+++PE N   WN +  G + N    +V+  F++M     V PN  T   +L 
Sbjct: 1   MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKG-LDVMPNCFTFPVILK 59

Query: 417 ACSRLGALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGMIESAIDVFQNMSAKDLIS 596
           +C ++ AL  G+ VH FV  + ++ N +V   LIDMYA  G I +A  VF  M  +++I+
Sbjct: 60  SCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIA 119

Query: 597 WNTLINGLAVHGHGTDALRFFD 662
           W  +ING         A R FD
Sbjct: 120 WTAMINGYITCCDLVTARRLFD 141



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
 Frame = +3

Query: 111 TMVSGYIKCGDMAAARKLFDVMPNRDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFS 290
           T++  Y   G + AA ++F  M  R++++W  +++GY    D+    +LF+  PER+I  
Sbjct: 91  TLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERDIVL 150

Query: 291 WNGLIGG*AHNGCFLEVLGAFKRMLNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFV 470
           WN +I G       +     F +M N+                       D+  W     
Sbjct: 151 WNTMISGYIEAKDVIRARELFDKMPNK-----------------------DVMSW----- 182

Query: 471 ESTEYKENIYVGNGLIDMYAKCGMIESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDAL 650
                       N +++ YA  G + +   +F+ M  +++ SWN LI G   +G  ++ L
Sbjct: 183 ------------NTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVL 230

Query: 651 RFFDEMKNVGE-KPDGITFIGIFCACSHMGRVEDGLKYFH 767
             F  M   G   P+  T + +  AC+ +G ++ G K+ H
Sbjct: 231 SAFKRMLVDGTVVPNDATLVNVLSACARLGALDLG-KWVH 269


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
            At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  424 bits (1090), Expect = e-116
 Identities = 198/280 (70%), Positives = 233/280 (83%)
 Frame = +3

Query: 3    VVAWTAMINGCLLYGDVVSARRLFDLAPERDIVLWNTMVSGYIKCGDMAAARKLFDVMPN 182
            +VAWT+MI+G +L   V  ARRLFDLAPERD+VLWN MVSGYI+ GDM AARKLFD MP 
Sbjct: 189  IVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPY 248

Query: 183  RDLMSWNTLLHGYANNADVEGCEKLFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRM 362
            RD MSWNT+L+GYANN DVE CE+LFEEMPERN+FSWNGLIGG AHNGCF EVL  FKRM
Sbjct: 249  RDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM 308

Query: 363  LNESSVQPNDATLVTVLSACSRLGALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGM 542
            L +  V PNDATLVTVLSAC+RLGALDLGKWVHV+  +  +K +IYVGN LIDMY+KCG+
Sbjct: 309  LIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGL 368

Query: 543  IESAIDVFQNMSAKDLISWNTLINGLAVHGHGTDALRFFDEMKNVGEKPDGITFIGIFCA 722
            IE+A++VF++M  KDLI+WN++I GLA HG G DAL  F +MK  GEKPDGITFIG+ C+
Sbjct: 369  IENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCS 428

Query: 723  CSHMGRVEDGLKYFHSMINRYFIIPQIEHYGCVVDLLGRA 842
            C+H+G VE+G  YF+SM+N Y I PQIEHYGC+VDL GRA
Sbjct: 429  CTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRA 468



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 42/136 (30%), Positives = 70/136 (51%)
 Frame = +3

Query: 255 LFEEMPERNIFSWNGLIGG*AHNGCFLEVLGAFKRMLNESSVQPNDATLVTVLSACSRLG 434
           LF+  P+  +  WN +  G  HN  + EV+  F +M     V+PN  T   VL +C+++G
Sbjct: 79  LFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKM-KSMDVRPNCFTFPLVLKSCAKIG 137

Query: 435 ALDLGKWVHVFVESTEYKENIYVGNGLIDMYAKCGMIESAIDVFQNMSAKDLISWNTLIN 614
           A   G+ +H  V     + N +V   LID+Y+    I SA  +F  M  +++++W ++I+
Sbjct: 138 AFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMIS 197

Query: 615 GLAVHGHGTDALRFFD 662
           G  +      A R FD
Sbjct: 198 GYILCNRVALARRLFD 213


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