BLASTX nr result

ID: Panax21_contig00036291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036291
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA36054.1| TPA: hypothetical protein ZEAMMB73_844330 [Zea m...    53   3e-11
gb|ACF81806.1| unknown [Zea mays]                                      53   3e-11
ref|XP_004170382.1| PREDICTED: cell differentiation protein RCD1...    57   3e-09
ref|XP_004144502.1| PREDICTED: cell differentiation protein RCD1...    57   3e-09
ref|XP_002741589.1| PREDICTED: rcd1 (required for cell different...    57   9e-09

>tpg|DAA36054.1| TPA: hypothetical protein ZEAMMB73_844330 [Zea mays]
          Length = 289

 Score = 53.1 bits (126), Expect(2) = 3e-11
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 291 SMLKKMGDTPPPRLLKNIIQCYLRMSEAPRACDALRRVLPPQLRSTAF 148
           +M+  + D P  RLLK+II+CYLR+S+ PRAC AL+  LP  L+   F
Sbjct: 201 NMVVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTF 248



 Score = 39.7 bits (91), Expect(2) = 3e-11
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 389 TSLGAIASLVKVATMILSKILTEQQGLLFCCGT 291
           TSLG I +LVKVAT I+ KIL +  GL + C T
Sbjct: 156 TSLGVIGALVKVATFIVQKILLDDVGLRYICAT 188


>gb|ACF81806.1| unknown [Zea mays]
          Length = 289

 Score = 53.1 bits (126), Expect(2) = 3e-11
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 291 SMLKKMGDTPPPRLLKNIIQCYLRMSEAPRACDALRRVLPPQLRSTAF 148
           +M+  + D P  RLLK+II+CYLR+S+ PRAC AL+  LP  L+   F
Sbjct: 201 NMVVSLADQPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTF 248



 Score = 39.7 bits (91), Expect(2) = 3e-11
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -2

Query: 389 TSLGAIASLVKVATMILSKILTEQQGLLFCCGT 291
           TSLG I +LVKVAT I+ KIL +  GL + C T
Sbjct: 156 TSLGVIGALVKVATFIVQKILLDDVGLRYICAT 188


>ref|XP_004170382.1| PREDICTED: cell differentiation protein RCD1 homolog [Cucumis
           sativus]
          Length = 305

 Score = 57.4 bits (137), Expect(2) = 3e-09
 Identities = 24/55 (43%), Positives = 39/55 (70%)
 Frame = -1

Query: 291 SMLKKMGDTPPPRLLKNIIQCYLRMSEAPRACDALRRVLPPQLRSTAFISVVHHE 127
           +M++++ + P  RLLK+I +CYL +SE+PRAC  L R+LP  L  +AF  ++H +
Sbjct: 223 TMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDD 277



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 356 VATMILSKILTEQQGLLFCC 297
           VAT I+ KIL  ++GL +CC
Sbjct: 189 VATFIVQKILMNEEGLRYCC 208


>ref|XP_004144502.1| PREDICTED: cell differentiation protein RCD1 homolog [Cucumis
           sativus]
          Length = 305

 Score = 57.4 bits (137), Expect(2) = 3e-09
 Identities = 24/55 (43%), Positives = 39/55 (70%)
 Frame = -1

Query: 291 SMLKKMGDTPPPRLLKNIIQCYLRMSEAPRACDALRRVLPPQLRSTAFISVVHHE 127
           +M++++ + P  RLLK+I +CYL +SE+PRAC  L R+LP  L  +AF  ++H +
Sbjct: 223 TMMERLSEEPSQRLLKHIFRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLHDD 277



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 356 VATMILSKILTEQQGLLFCC 297
           VAT I+ KIL  ++GL +CC
Sbjct: 189 VATFIVQKILMNEEGLRYCC 208


>ref|XP_002741589.1| PREDICTED: rcd1 (required for cell differentiation) homolog 1-like
           [Saccoglossus kowalevskii]
          Length = 308

 Score = 57.4 bits (137), Expect(2) = 9e-09
 Identities = 25/51 (49%), Positives = 39/51 (76%)
 Frame = -1

Query: 288 MLKKMGDTPPPRLLKNIIQCYLRMSEAPRACDALRRVLPPQLRSTAFISVV 136
           M+ ++G  P  RLLK++++CYLR+S+ PRA +ALR+ LP QL+ T F +V+
Sbjct: 226 MVIQLGKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAAVL 276



 Score = 26.9 bits (58), Expect(2) = 9e-09
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 356 VATMILSKILTEQQGLLFCCGT 291
           VAT IL KIL ++ GL + C T
Sbjct: 191 VATFILQKILLDETGLSYICQT 212


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