BLASTX nr result

ID: Panax21_contig00036268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036268
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|2...   117   9e-25
ref|XP_002280002.2| PREDICTED: uncharacterized protein LOC100252...   114   1e-23
emb|CBI20724.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...   113   2e-23
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              110   1e-22

>ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|222833314|gb|EEE71791.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  117 bits (294), Expect = 9e-25
 Identities = 68/159 (42%), Positives = 88/159 (55%), Gaps = 10/159 (6%)
 Frame = -1

Query: 448 DGHRESLEKEQKAPSLGIDIRSENLPNHFSTELNVHRERISK----------QKSAQQLI 299
           D    S+E+EQ         + E+ P  FST + + R+R ++          +K     I
Sbjct: 396 DVEMPSVEEEQD--------KVEDWPGPFSTAMKIIRDRANRLNLQQRGSTSEKEKHVPI 447

Query: 298 RWKPLEDHDHNISKHFVPSLLDISLKVLADNADTIVSLEAVPDVLKRRLSNLLCDFRKMN 119
            W P  D     SK  VPSL ++ +K+L  NAD I SLE VPD L+ RL  LLCD R+MN
Sbjct: 448 TWMPKTDRACKPSKGLVPSLQELCMKILVKNADAIASLEHVPDALRHRLCQLLCDSRRMN 507

Query: 118 VKTLDLFVRGSPAEIRIKDCSWITENQFTKS*ESFDPRN 2
              L L VRGSP EIRI+DCSW+ E +FTK+ E  D RN
Sbjct: 508 AHFLALLVRGSPMEIRIRDCSWLAEEEFTKNFEVCDSRN 546


>ref|XP_002280002.2| PREDICTED: uncharacterized protein LOC100252702 [Vitis vinifera]
          Length = 787

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
 Frame = -1

Query: 472 RLARSLEEDGHRESLEKEQKAPSLGIDIRSENLPNHFSTELN-VHRERISKQKSAQQLIR 296
           +LA    E+  R ++   +KA    ++ ++E+    F   +  +++ ++  +K++  LI 
Sbjct: 270 QLAHFDPEEAERYAVYISKKAQKPSVNKKAEDFEGPFYEAMEMINKRKLVAEKNSTPLIG 329

Query: 295 WKPLEDHDHNISKHFVPSLLDISLKVLADNADTIVSLEAVPDVLKRRLSNLLCDFRKMNV 116
           W P     H I+K  VPSL+D+S+  LA N+D IVSLE +PDVL+ ++S  +C  R+MN 
Sbjct: 330 WVP-STQGHTITKRLVPSLVDVSVDALAKNSDAIVSLELIPDVLRHKISRAICRGRRMNA 388

Query: 115 KTLDLFVRGSPAEIRIKDCSWITENQFT 32
             ++L +RGSP EIR+ DCSW+TE QFT
Sbjct: 389 HFMELLLRGSPTEIRLDDCSWMTEEQFT 416


>emb|CBI20724.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
 Frame = -1

Query: 472 RLARSLEEDGHRESLEKEQKAPSLGIDIRSENLPNHFSTELN-VHRERISKQKSAQQLIR 296
           +LA    E+  R ++   +KA    ++ ++E+    F   +  +++ ++  +K++  LI 
Sbjct: 475 QLAHFDPEEAERYAVYISKKAQKPSVNKKAEDFEGPFYEAMEMINKRKLVAEKNSTPLIG 534

Query: 295 WKPLEDHDHNISKHFVPSLLDISLKVLADNADTIVSLEAVPDVLKRRLSNLLCDFRKMNV 116
           W P     H I+K  VPSL+D+S+  LA N+D IVSLE +PDVL+ ++S  +C  R+MN 
Sbjct: 535 WVP-STQGHTITKRLVPSLVDVSVDALAKNSDAIVSLELIPDVLRHKISRAICRGRRMNA 593

Query: 115 KTLDLFVRGSPAEIRIKDCSWITENQFT 32
             ++L +RGSP EIR+ DCSW+TE QFT
Sbjct: 594 HFMELLLRGSPTEIRLDDCSWMTEEQFT 621


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 8/135 (5%)
 Frame = -1

Query: 382 ENLPNHFSTELNVHRERISKQKSAQ--------QLIRWKPLEDHDHNISKHFVPSLLDIS 227
           E+ P  FST + + R+R SK ++A+        + I+W P     +      VPSL ++ 
Sbjct: 81  EDWPGPFSTAMKIIRDRGSKLQNAEASSQASLCESIKWVPNAKRGNAGVNVSVPSLQEMC 140

Query: 226 LKVLADNADTIVSLEAVPDVLKRRLSNLLCDFRKMNVKTLDLFVRGSPAEIRIKDCSWIT 47
           LK+L  N D I SLE+VPD L+ RLS LLCD R++N   L+L VRG+P EIR++DCSW+T
Sbjct: 141 LKILVKNVDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLT 200

Query: 46  ENQFTKS*ESFDPRN 2
           E QFT+S  + D  N
Sbjct: 201 EEQFTESFRTCDTEN 215


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  110 bits (276), Expect = 1e-22
 Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 9/151 (5%)
 Frame = -1

Query: 454 EEDGHRESLEKEQKAPSLGIDIRSENLPNHFSTELNVHRERISKQKSAQQL--------- 302
           +E  +  S E E + PS G +  +E+ P  FST + + ++R  KQ + Q           
Sbjct: 357 QEMENHPSREAEIQRPSEGGEKENEDWPGPFSTAMKIIKDREKKQNTQQNSSSDRNRPAH 416

Query: 301 IRWKPLEDHDHNISKHFVPSLLDISLKVLADNADTIVSLEAVPDVLKRRLSNLLCDFRKM 122
           + W P +       K   PSL ++ L+VLA N D I SLE++PD L+ +LS LLCD R+M
Sbjct: 417 VIWSPRKVKSSECPKPLAPSLQEMCLEVLAQNGDAITSLESIPDALRHKLSQLLCDSRRM 476

Query: 121 NVKTLDLFVRGSPAEIRIKDCSWITENQFTK 29
           N   L+L V GSP E+ ++DCSW+TE +F +
Sbjct: 477 NSHILELLVSGSPFEVCVRDCSWLTEEEFAR 507


Top