BLASTX nr result

ID: Panax21_contig00036260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036260
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512726.1| Cyclic nucleotide-gated ion channel, putativ...    72   8e-11
ref|XP_004144729.1| PREDICTED: probable cyclic nucleotide-gated ...    67   2e-09
emb|CBI25178.3| unnamed protein product [Vitis vinifera]               66   4e-09
ref|XP_002264161.1| PREDICTED: putative cyclic nucleotide-gated ...    66   4e-09
ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ...    65   6e-09

>ref|XP_002512726.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223547737|gb|EEF49229.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 1005

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
 Frame = +1

Query: 373 MFDCGYK---YGRQGEKFVRLEDLDSRSSFKSDTGGMKRHGFSLEGLTNAGLSKNNPSVS 543
           MFDCGYK    G Q EKFVRL+D+DS  S  ++  GMK+   +LEG +  G  K NPS S
Sbjct: 1   MFDCGYKSQFIGGQREKFVRLDDIDSTMSLNTNKAGMKKFWLNLEGFSLRGRRKRNPSQS 60

Query: 544 FRLGMKRRS 570
           FR GMK+ S
Sbjct: 61  FRFGMKKGS 69


>ref|XP_004144729.1| PREDICTED: probable cyclic nucleotide-gated ion channel 6-like
           [Cucumis sativus]
          Length = 731

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = +1

Query: 373 MFDCGYK---YGRQGEKFVRLEDLDSRSSFKSDTGGMKRHGFSLEGLTNAGLSKNNPSVS 543
           MFDCGYK    G Q EKFVRL+DLDSR S  SD+ GM+R GF+++G   A    + PS S
Sbjct: 1   MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDS-GMRRCGFNIDGFNRAVHGNDKPSGS 59

Query: 544 FRLGMKRRS 570
           F+ GM++ S
Sbjct: 60  FKRGMRKGS 68


>emb|CBI25178.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/69 (57%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
 Frame = +1

Query: 373 MFDCGYK---YGRQGEKFVRLEDLDSRSSFKSDTGGMKRHGFSLEGLTNAGLSKNNPSVS 543
           MFDCGYK    G Q EKFVRL+DLDS  S  SD  GM R  FSL GLT  G    + S S
Sbjct: 1   MFDCGYKSQYIGGQREKFVRLDDLDSTLSVPSD--GMNRCAFSLAGLTPWGRPNRHSSKS 58

Query: 544 FRLGMKRRS 570
           FR+G+KR S
Sbjct: 59  FRIGVKRGS 67


>ref|XP_002264161.1| PREDICTED: putative cyclic nucleotide-gated ion channel 8-like
           [Vitis vinifera]
          Length = 743

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/69 (57%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
 Frame = +1

Query: 373 MFDCGYK---YGRQGEKFVRLEDLDSRSSFKSDTGGMKRHGFSLEGLTNAGLSKNNPSVS 543
           MFDCGYK    G Q EKFVRL+DLDS  S  SD  GM R  FSL GLT  G    + S S
Sbjct: 1   MFDCGYKSQYIGGQREKFVRLDDLDSTLSVPSD--GMNRCAFSLAGLTPWGRPNRHSSKS 58

Query: 544 FRLGMKRRS 570
           FR+G+KR S
Sbjct: 59  FRIGVKRGS 67


>ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5 [Vitis
           vinifera] gi|297743648|emb|CBI36531.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
 Frame = +1

Query: 373 MFDCGYK---YGRQGEKFVRLEDLDSRSSFKSDTGGMKRHGFSLEGLTNAGLSKNNPSVS 543
           MFDCG+K    G Q EKFVRL+DLDS+ S  SD G + R GFS++GL++ GL+++  S S
Sbjct: 1   MFDCGHKSQYMGVQREKFVRLDDLDSKLSISSDPG-VNRCGFSIDGLSHVGLARSTSSRS 59

Query: 544 FRLGMKRRS 570
            + GM++ S
Sbjct: 60  LKKGMRKGS 68


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