BLASTX nr result
ID: Panax21_contig00036241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00036241 (1056 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus tr... 160 6e-37 gb|AFK34406.1| unknown [Lotus japonicus] 133 6e-29 ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp.... 128 3e-27 pir||T08999 hypothetical protein - spinach chloroplast 127 6e-27 ref|XP_004174110.1| PREDICTED: photosystem II reaction center pr... 121 3e-25 >ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus trichocarpa] gi|133712057|gb|ABO36700.1| conserved hypothetical protein [Populus trichocarpa] Length = 113 Score = 160 bits (404), Expect = 6e-37 Identities = 86/115 (74%), Positives = 90/115 (78%) Frame = +1 Query: 46 LTTEKNSGGGSFGFWIWDE*VQEMRELRIPTRKTNPIHNDVPENKTFLLLDQPSGEANTT 225 L T KN G G F F IW VQEMRELRIPTRKTNPIHNDVPEN TFLLLDQPSGE TT Sbjct: 3 LATLKNWGRGLFHFCIW---VQEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEKTT 59 Query: 226 GTPINKINDVAINAKTANWKARVMLLILQATNK*TIPFDP*KLY*NTLHHTGILP 390 GT INKI++VAINAKTANWKA VM LILQATNK TIPFDP + HH GI+P Sbjct: 60 GTLINKIDEVAINAKTANWKAIVMFLILQATNKRTIPFDP-SIRQKKTHHGGIIP 113 >gb|AFK34406.1| unknown [Lotus japonicus] Length = 80 Score = 133 bits (335), Expect = 6e-29 Identities = 66/77 (85%), Positives = 69/77 (89%) Frame = +1 Query: 115 MRELRIPTRKTNPIHNDVPENKTFLLLDQPSGEANTTGTPINKINDVAINAKTANWKARV 294 MRELRIPTR TN IHNDVPEN TFLLLDQPSGEANTTGT INK+N+VAINAKTANWKA V Sbjct: 1 MRELRIPTRNTNAIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 60 Query: 295 MLLILQATNK*TIPFDP 345 + LILQ TNK TIPFDP Sbjct: 61 IFLILQITNKRTIPFDP 77 >ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297334191|gb|EFH64609.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 76 Score = 128 bits (321), Expect = 3e-27 Identities = 64/71 (90%), Positives = 68/71 (95%) Frame = -2 Query: 323 LLVAWRIKSMTLAFQLAVFALIATSLILLIGVPVVFASPDGWSSNKNVLFSGTSLWIGLV 144 LL+AWRIK+MT+AFQLAVFALI TS ILLI VPVVFASPDGWSSNKNV+FSGTSLWIGLV Sbjct: 6 LLIAWRIKNMTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLV 65 Query: 143 FLVGILNSLIS 111 FLVGILNSLIS Sbjct: 66 FLVGILNSLIS 76 >pir||T08999 hypothetical protein - spinach chloroplast Length = 90 Score = 127 bits (318), Expect = 6e-27 Identities = 63/77 (81%), Positives = 68/77 (88%) Frame = +1 Query: 115 MRELRIPTRKTNPIHNDVPENKTFLLLDQPSGEANTTGTPINKINDVAINAKTANWKARV 294 MRELRIPTRKTNP HNDVPEN FLLLDQPSGEANTTGT I+KI++VAINAKTANWKA V Sbjct: 1 MRELRIPTRKTNPSHNDVPENTIFLLLDQPSGEANTTGTLISKIDEVAINAKTANWKAIV 60 Query: 295 MLLILQATNK*TIPFDP 345 + +ILQA K TIPFDP Sbjct: 61 IRIILQAIKKQTIPFDP 77 >ref|XP_004174110.1| PREDICTED: photosystem II reaction center protein Z-like [Cucumis sativus] Length = 76 Score = 121 bits (304), Expect = 3e-25 Identities = 61/71 (85%), Positives = 65/71 (91%) Frame = -2 Query: 323 LLVAWRIKSMTLAFQLAVFALIATSLILLIGVPVVFASPDGWSSNKNVLFSGTSLWIGLV 144 LLV WRI++MT+AFQLAVFALI TS ILLI VPVVFASPDGWS NK V+FSGTSLWIGLV Sbjct: 6 LLVDWRIRNMTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKKVVFSGTSLWIGLV 65 Query: 143 FLVGILNSLIS 111 FLVGILNSLIS Sbjct: 66 FLVGILNSLIS 76