BLASTX nr result

ID: Panax21_contig00036221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036221
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CBI39148.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    65   6e-09

>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = +3

Query: 207 SSCKLPHDVVLNILSRLPVKTLLRFRCVCKPWKSLIRSPKLINLHLSHQSSATTSPLLLL 386
           + C LP DV++ ILS LPVKTLL+F+CVCK W  +I S   I+LHL++  +   S  LL 
Sbjct: 5   NGCLLPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLA 64

Query: 387 HSVDKRSLD 413
           H V  + L+
Sbjct: 65  HFVCPQLLE 73


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = +3

Query: 207 SSCKLPHDVVLNILSRLPVKTLLRFRCVCKPWKSLIRSPKLINLHLSHQSSATTSPLLLL 386
           + C LP DV++ ILS LPVKTLL+F+CVCK W  +I S   I+LHL++  +   S  LL 
Sbjct: 5   NGCLLPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLA 64

Query: 387 HSVDKRSLD 413
           H V  + L+
Sbjct: 65  HFVCPQLLE 73


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = +3

Query: 219 LPHDVVLNILSRLPVKTLLRFRCVCKPWKSLIRSPKLINLHLSHQSSATTSPLLL 383
           LP DV++ ILSRLPVK LL+F+CVCK W ++I SPKLI+ HL +      S  LL
Sbjct: 45  LPEDVIIEILSRLPVKNLLQFKCVCKSWHAIITSPKLISKHLRNYYDKNDSDCLL 99


>emb|CBI39148.3| unnamed protein product [Vitis vinifera]
          Length = 711

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = +3

Query: 219 LPHDVVLNILSRLPVKTLLRFRCVCKPWKSLIRSPKLINLHLSHQSSATTSPLLLLHSVD 398
           +P  ++++ILSRLPVK+LLRFRCVCK W +LI  P+ +  HL  Q       L++ HSVD
Sbjct: 4   IPEVIMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVETHLRQQHKRPVIGLVVPHSVD 63


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/57 (43%), Positives = 44/57 (77%)
 Frame = +3

Query: 219 LPHDVVLNILSRLPVKTLLRFRCVCKPWKSLIRSPKLINLHLSHQSSATTSPLLLLH 389
           LP ++  +ILSRLP+ +L++F+CVC+ W++L++ P+L++L+LS  +  T  P L+LH
Sbjct: 28  LPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILH 84


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