BLASTX nr result

ID: Panax21_contig00036188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036188
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    92   9e-38
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    92   9e-38
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...    92   2e-37
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...    92   2e-37
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]          92   2e-37

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 91.7 bits (226), Expect(2) = 9e-38
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +2

Query: 272 MCGRKNMFVELDESVCGNDTFGDSSKIPVKGKDKILIRLKDGRHQFISNVYYVQNMNNNL 451
           MCGRK+MF ELDESV GN   GD SK+ VKGK  ILIRLK+G HQFISNVYY+ +M  N+
Sbjct: 345 MCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNI 404

Query: 452 LSL 460
           LSL
Sbjct: 405 LSL 407



 Score = 90.5 bits (223), Expect(2) = 9e-38
 Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 16  TRGRGRGNFSRPYQKRYDKSRVQCYNCHDYGHYASECKNES-KDIEVKSNYVEKNIDEVE 192
           +RGRG+G+     + RYDKS V+CYNC  +GHYASECK  S K  E K+NYVE+ I E +
Sbjct: 262 SRGRGKGH----PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEED 317

Query: 193 PTLLLTYKGEMSEDDNT*YLDTGANNHVWKKK 288
             L+ +YK +  E+++  YLD+GA+NH+  +K
Sbjct: 318 MLLMASYKKDEQEENHKWYLDSGASNHMCGRK 349


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 91.7 bits (226), Expect(2) = 9e-38
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +2

Query: 272 MCGRKNMFVELDESVCGNDTFGDSSKIPVKGKDKILIRLKDGRHQFISNVYYVQNMNNNL 451
           MCGRK+MF ELDESV GN   GD SK+ VKGK  ILIRLK+G HQFISNVYY+ +M  N+
Sbjct: 345 MCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNI 404

Query: 452 LSL 460
           LSL
Sbjct: 405 LSL 407



 Score = 90.5 bits (223), Expect(2) = 9e-38
 Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 16  TRGRGRGNFSRPYQKRYDKSRVQCYNCHDYGHYASECKNES-KDIEVKSNYVEKNIDEVE 192
           +RGRG+G+     + RYDKS V+CYNC  +GHYASECK  S K  E K+NYVE+ I E +
Sbjct: 262 SRGRGKGH----PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEED 317

Query: 193 PTLLLTYKGEMSEDDNT*YLDTGANNHVWKKK 288
             L+ +YK +  E+++  YLD+GA+NH+  +K
Sbjct: 318 MLLMASYKKDEQEENHKWYLDSGASNHMCGRK 349


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score = 91.7 bits (226), Expect(2) = 2e-37
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +2

Query: 272 MCGRKNMFVELDESVCGNDTFGDSSKIPVKGKDKILIRLKDGRHQFISNVYYVQNMNNNL 451
           MCGRK+MF ELDESV GN   GD SK+ VKGK  ILIRLK+G HQFISNVYY+ +M  N+
Sbjct: 345 MCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNI 404

Query: 452 LSL 460
           LSL
Sbjct: 405 LSL 407



 Score = 89.0 bits (219), Expect(2) = 2e-37
 Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 16  TRGRGRGNFSRPYQKRYDKSRVQCYNCHDYGHYASECKNES-KDIEVKSNYVEKNIDEVE 192
           +RGRG+G+     + RYDKS V+CYNC  +GHYASECK  S K  E K+NYVE+ I E +
Sbjct: 262 SRGRGKGH----PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEED 317

Query: 193 PTLLLTYKGEMSEDDNT*YLDTGANNHVWKKK 288
             L+ +YK +  ++++  YLD+GA+NH+  +K
Sbjct: 318 MLLMASYKKDEQKENHKWYLDSGASNHMCGRK 349


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score = 91.7 bits (226), Expect(2) = 2e-37
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +2

Query: 272 MCGRKNMFVELDESVCGNDTFGDSSKIPVKGKDKILIRLKDGRHQFISNVYYVQNMNNNL 451
           MCGRK+MF ELDESV GN   GD SK+ VKGK  ILIRLK+G HQFISNVYY+ +M  N+
Sbjct: 345 MCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNI 404

Query: 452 LSL 460
           LSL
Sbjct: 405 LSL 407



 Score = 89.0 bits (219), Expect(2) = 2e-37
 Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 16  TRGRGRGNFSRPYQKRYDKSRVQCYNCHDYGHYASECKNES-KDIEVKSNYVEKNIDEVE 192
           +RGRG+G+     + RYDKS V+CYNC  +GHYASECK  S K  + K+NYVE+ I E +
Sbjct: 262 SRGRGKGH----PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEED 317

Query: 193 PTLLLTYKGEMSEDDNT*YLDTGANNHVWKKK 288
             L+ +YK +  E+++  YLD+GA+NH+  +K
Sbjct: 318 MLLMASYKKDEQEENHKWYLDSGASNHMCGRK 349


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score = 91.7 bits (226), Expect(2) = 2e-37
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +2

Query: 272 MCGRKNMFVELDESVCGNDTFGDSSKIPVKGKDKILIRLKDGRHQFISNVYYVQNMNNNL 451
           MCGRK+MF ELDESV GN   GD SK+ VKGK  ILIRLK+G HQFISNVYY+ +M  N+
Sbjct: 361 MCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNI 420

Query: 452 LSL 460
           LSL
Sbjct: 421 LSL 423



 Score = 89.0 bits (219), Expect(2) = 2e-37
 Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 16  TRGRGRGNFSRPYQKRYDKSRVQCYNCHDYGHYASECKNES-KDIEVKSNYVEKNIDEVE 192
           +RGRG+G+     + RYDKS V+CYNC  +GHYASECK  S K  + K+NYVE+ I E +
Sbjct: 278 SRGRGKGH----PKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEED 333

Query: 193 PTLLLTYKGEMSEDDNT*YLDTGANNHVWKKK 288
             L+ +YK +  E+++  YLD+GA+NH+  +K
Sbjct: 334 MLLMASYKKDEQEENHKWYLDSGASNHMCGRK 365


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