BLASTX nr result

ID: Panax21_contig00036183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036183
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520249.1| Chitin-inducible gibberellin-responsive prot...    72   1e-10
gb|ADL36813.1| SCL domain class transcription factor [Malus x do...    69   5e-10
ref|XP_003523408.1| PREDICTED: scarecrow-like protein 1-like [Gl...    65   1e-08
ref|XP_002302201.1| GRAS family transcription factor [Populus tr...    63   5e-08
ref|XP_003526667.1| PREDICTED: scarecrow-like protein 1-like iso...    62   7e-08

>ref|XP_002520249.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
           communis] gi|223540468|gb|EEF42035.1| Chitin-inducible
           gibberellin-responsive protein, putative [Ricinus
           communis]
          Length = 559

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
 Frame = +2

Query: 311 MSLVRPA----SSYGDRKLSPLNGSNESSALSTSTTDSNKHSITYGTESYSSKSYDPKYF 478
           MSLVRPA    +SY + KL  LNGSN++S LST    ++K    Y TESYSS+SY+ KYF
Sbjct: 1   MSLVRPAELSATSYRNHKLYSLNGSNDNSGLSTQMFGTDKRKTIYMTESYSSESYE-KYF 59

Query: 479 LDSPTDEL 502
           +DSPTDEL
Sbjct: 60  IDSPTDEL 67


>gb|ADL36813.1| SCL domain class transcription factor [Malus x domestica]
          Length = 579

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
 Frame = +2

Query: 311 MSLVRPA----SSYGDRKLSPLNGSNESSALSTSTTDSNKHSITYGTESYSSKSYDPKYF 478
           MSLVRPA    +SY +RKL  LNGSN+ S+LST    +++H   Y  +SYSS++Y+ KYF
Sbjct: 1   MSLVRPAELSTTSYRNRKLYSLNGSNDGSSLSTQIFGADEHKAVYVNDSYSSETYE-KYF 59

Query: 479 LDSPTDEL-------------NPXXXXXXXXXXXXYQLMAVQEPFDSSYMAMRDSDAYQS 619
           LDSP +E+             NP               +  Q P+ +S M+  +SD  +S
Sbjct: 60  LDSPMEEVTHPSSSGISGSSTNPRGASYYQLTAGSVSSLNTQNPYITSLMSNFESDYLES 119


>ref|XP_003523408.1| PREDICTED: scarecrow-like protein 1-like [Glycine max]
          Length = 596

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
 Frame = +2

Query: 311 MSLVRPA----SSYGDRKLSPLNGSNESSALSTSTTDSNKHSITYGTESYSSKSYDPKYF 478
           MSLVR A    +SY + KL  L G++    LS+     +KH  TY T++Y S+SY+ KYF
Sbjct: 1   MSLVRSADLAPTSYENAKLFSLKGTDVRPGLSSQIFGPDKHRSTYMTDTYPSESYE-KYF 59

Query: 479 LDSPTDE-------------LNPXXXXXXXXXXXXYQLMAVQEPFDSSYMAMRDSDAYQS 619
            DS T+E             ++P               M    PFDSS+M+ R  DAYQS
Sbjct: 60  HDSQTEEIIEPSSSSISGSSIHPDVASSYQIRAISGASMVANNPFDSSFMSTRHRDAYQS 119

Query: 620 N 622
           N
Sbjct: 120 N 120


>ref|XP_002302201.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222843927|gb|EEE81474.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 585

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
 Frame = +2

Query: 311 MSLVRPA----SSYGDRKLSPLNGSNESSALSTSTTDSNKHSITYGTESYSSKSYDPKYF 478
           MSLV PA    + YG+ KL  L GSN++S LS      +K    Y T+SYSS+SY+ KYF
Sbjct: 1   MSLVGPAELSATPYGNHKLYSLKGSNDNSGLSAQIFCPDKRQNMYMTDSYSSESYE-KYF 59

Query: 479 LDSPTDEL------NPXXXXXXXXXXXXYQL-------MAVQ-EPFDSSYMAMRDSDAYQ 616
           LDSPT+EL                    YQL       M+ Q +P+D+ +      D YQ
Sbjct: 60  LDSPTEELIQPSSSGISGNSAPPQGTSSYQLRKNLGPSMSPQDDPYDACFTLTTPCDGYQ 119

Query: 617 SNFE 628
            N E
Sbjct: 120 FNSE 123


>ref|XP_003526667.1| PREDICTED: scarecrow-like protein 1-like isoform 1 [Glycine max]
           gi|356515967|ref|XP_003526668.1| PREDICTED:
           scarecrow-like protein 1-like isoform 2 [Glycine max]
          Length = 600

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
 Frame = +2

Query: 311 MSLVRPA----SSYGDRKLSPLNGSNESSALSTSTTDSNKHSITYGTESYSSKSYDPKYF 478
           MSLVR A    +SY + KL  L G++    LS+   D +KH   Y T++YS + Y+ KYF
Sbjct: 1   MSLVRSADLAPTSYENAKLFSLKGTDVRPGLSSQIFDPDKHRSMYMTDAYSGEGYE-KYF 59

Query: 479 LDSPTDEL------NPXXXXXXXXXXXXYQL-------MAVQEPFDSSYMAMRDSDAYQS 619
            DS T+EL      +             YQL       M    P DSS+M+ R  DAYQS
Sbjct: 60  HDSQTEELIEPSSSSISGSSIHPDVASSYQLRASSGASMVANNPSDSSFMSTRHHDAYQS 119

Query: 620 N 622
           N
Sbjct: 120 N 120


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