BLASTX nr result

ID: Panax21_contig00036173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036173
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275167.1| PREDICTED: succinate dehydrogenase assembly ...   146   4e-33
ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002532148.1| catalytic, putative [Ricinus communis] gi|22...   130   3e-28
gb|AFK43113.1| unknown [Lotus japonicus]                              126   3e-27
ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycin...   125   1e-26

>ref|XP_002275167.1| PREDICTED: succinate dehydrogenase assembly factor 1 homolog,
           mitochondrial-like [Vitis vinifera]
          Length = 96

 Score =  146 bits (368), Expect = 4e-33
 Identities = 75/92 (81%), Positives = 80/92 (86%)
 Frame = -2

Query: 341 MGASSGPKLSGMQKQVLALYRGFLRAARSKSPEDRRRIELIVSDEFRRNSKQVDRNNFLY 162
           MGASSGP+ SGMQKQVL LYRGFLRAARSKSPEDRRRIE  VS EFRRNSK VDR NFLY
Sbjct: 1   MGASSGPRFSGMQKQVLGLYRGFLRAARSKSPEDRRRIESFVSAEFRRNSKLVDRKNFLY 60

Query: 161 IEYLLRRGKHQLDLLKSPATVGLSSLNVKSSD 66
           IEYLLRRGK QL+ L SPAT+GLSSLN+  S+
Sbjct: 61  IEYLLRRGKKQLEQLNSPATLGLSSLNLSFSE 92


>ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|222846497|gb|EEE84044.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/97 (73%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
 Frame = -2

Query: 341 MGASSG--PKLSGMQKQVLALYRGFLRAARSKSPEDRRRIELIVSDEFRRNSKQVDRNNF 168
           MG S+G   +LSGMQKQVL LYRGFLRAARSKSPEDRR+IE  VS EFRRNSKQVDR NF
Sbjct: 1   MGPSTGGRTRLSGMQKQVLTLYRGFLRAARSKSPEDRRQIESFVSAEFRRNSKQVDRKNF 60

Query: 167 LYIEYLLRRGKHQLDLLKSPATVGLSSLNVKSSDAKN 57
           +YIEYLLRRGK QL+ L SP TVGLS +N   S+ +N
Sbjct: 61  IYIEYLLRRGKKQLEQLNSPDTVGLSYMNATFSETEN 97


>ref|XP_002532148.1| catalytic, putative [Ricinus communis] gi|223528158|gb|EEF30222.1|
           catalytic, putative [Ricinus communis]
          Length = 93

 Score =  130 bits (326), Expect = 3e-28
 Identities = 66/88 (75%), Positives = 74/88 (84%)
 Frame = -2

Query: 341 MGASSGPKLSGMQKQVLALYRGFLRAARSKSPEDRRRIELIVSDEFRRNSKQVDRNNFLY 162
           M  S G KLSGMQKQVL+LYR FLRAAR KSPEDRR+IE +VS EFRRNSK+VDR NFLY
Sbjct: 1   MVVSRGTKLSGMQKQVLSLYRSFLRAARLKSPEDRRQIESLVSAEFRRNSKEVDRKNFLY 60

Query: 161 IEYLLRRGKHQLDLLKSPATVGLSSLNV 78
           IEYL+RRG+ QLD LKSP  +GLSS N+
Sbjct: 61  IEYLIRRGRKQLDQLKSPGILGLSSFNL 88


>gb|AFK43113.1| unknown [Lotus japonicus]
          Length = 91

 Score =  126 bits (317), Expect = 3e-27
 Identities = 65/84 (77%), Positives = 71/84 (84%)
 Frame = -2

Query: 320 KLSGMQKQVLALYRGFLRAARSKSPEDRRRIELIVSDEFRRNSKQVDRNNFLYIEYLLRR 141
           +LSGMQKQVL+LYRGFLRAARSKS E+RR +E IVS EFRRNSK+VDR NFLYIEYLLRR
Sbjct: 5   RLSGMQKQVLSLYRGFLRAARSKSEEERRNMESIVSQEFRRNSKEVDRKNFLYIEYLLRR 64

Query: 140 GKHQLDLLKSPATVGLSSLNVKSS 69
           G  QLD LK+P T GLSSL V  S
Sbjct: 65  GTRQLDQLKNPGTTGLSSLQVDLS 88


>ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycine max]
           gi|255637377|gb|ACU19017.1| unknown [Glycine max]
          Length = 97

 Score =  125 bits (313), Expect = 1e-26
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = -2

Query: 341 MGASSGPKLSGMQKQVLALYRGFLRAARSKSPEDRRRIELIVSDEFRRNSKQVDRNNFLY 162
           MG+S   +LSGMQKQVL+LYRGFLRAARSKS E+R +IE I+S EFRRN++ VDR NFLY
Sbjct: 1   MGSSKVQRLSGMQKQVLSLYRGFLRAARSKSEEERCKIESIISQEFRRNAEDVDRKNFLY 60

Query: 161 IEYLLRRGKHQLDLLKSPATVGLSSLNVKSS 69
           IEYLLRRG  QLD LK+P T GLSSL +  S
Sbjct: 61  IEYLLRRGNKQLDQLKNPGTTGLSSLQLHYS 91


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