BLASTX nr result

ID: Panax21_contig00036164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036164
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP9...   329   2e-88
ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [...   326   1e-87
emb|CBI26317.3| unnamed protein product [Vitis vinifera]              323   1e-86
ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC...   322   2e-86
ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic reco...   321   5e-86

>gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP98985.1| DMC1
           [Hieracium caespitosum]
          Length = 343

 Score =  329 bits (843), Expect = 2e-88
 Identities = 167/174 (95%), Positives = 171/174 (98%), Gaps = 1/174 (0%)
 Frame = -2

Query: 520 AYIDTEGTFRPDRIVAIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 341
           AYIDTEGTFRPDRIV IAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR
Sbjct: 163 AYIDTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 222

Query: 340 LLIVDSVIALFRVDFTGR-ELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGV 164
           LLIVDSVIALFRVDFTGR ELAERQQKLAQMLSRL KIAEEFNVAVYMTNQVIADPGGGV
Sbjct: 223 LLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGV 282

Query: 163 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAVFQITAG 2
           FISDPKKPAGGHVLAHAAT+RLMFRKGKGEQRVCKVFDAPNLPE+EA+FQIT+G
Sbjct: 283 FISDPKKPAGGHVLAHAATVRLMFRKGKGEQRVCKVFDAPNLPESEAIFQITSG 336


>ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [Glycine max]
           gi|3219787|sp|Q96449.1|DMC1_SOYBN RecName: Full=Meiotic
           recombination protein DMC1 homolog
           gi|1518157|gb|AAB07025.1| RecA/Rad51/DMC1-like protein
           [Glycine max]
          Length = 345

 Score =  326 bits (835), Expect = 1e-87
 Identities = 164/174 (94%), Positives = 171/174 (98%), Gaps = 1/174 (0%)
 Frame = -2

Query: 520 AYIDTEGTFRPDRIVAIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 341
           AYIDTEGTFRPDRIV IAERFGMD GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR
Sbjct: 165 AYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 224

Query: 340 LLIVDSVIALFRVDFTGR-ELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGV 164
           LLIVDSVIALFRVDF+GR ELA+RQQKLAQMLSRLIKIAEEFNVAVYMTNQVI+DPGGGV
Sbjct: 225 LLIVDSVIALFRVDFSGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGV 284

Query: 163 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAVFQITAG 2
           F++DPKKPAGGHVLAHAAT+RLMFRKGKGEQR+CKVFDAPNLPEAEAVFQITAG
Sbjct: 285 FVTDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPEAEAVFQITAG 338


>emb|CBI26317.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  323 bits (827), Expect = 1e-86
 Identities = 168/178 (94%), Positives = 170/178 (95%), Gaps = 5/178 (2%)
 Frame = -2

Query: 520 AYIDTEGTFRPDRIVAIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 341
           AYIDTEGTFRPDRIV IAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR
Sbjct: 164 AYIDTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 223

Query: 340 LLIVDSVIALFRVDFTGR-ELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGV 164
           LLIVDSVIALFRVDFTGR ELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQVIADPGGGV
Sbjct: 224 LLIVDSVIALFRVDFTGRGELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGV 283

Query: 163 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAV----FQITAG 2
           FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEA+    FQIT G
Sbjct: 284 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFPLFQITPG 341


>ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
           sativus] gi|449504138|ref|XP_004162263.1| PREDICTED:
           meiotic recombination protein DMC1 homolog [Cucumis
           sativus]
          Length = 345

 Score =  322 bits (825), Expect = 2e-86
 Identities = 161/174 (92%), Positives = 169/174 (97%), Gaps = 1/174 (0%)
 Frame = -2

Query: 520 AYIDTEGTFRPDRIVAIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 341
           AYIDTEGTFRPDRIV IAERFGMD GAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF+
Sbjct: 165 AYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFK 224

Query: 340 LLIVDSVIALFRVDFTGR-ELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGV 164
           LLIVDS+IALFRVDFTGR ELAERQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGGV
Sbjct: 225 LLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGV 284

Query: 163 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAVFQITAG 2
           F+SDPKKPAGGHVLAHAAT+RLMFRKGKGEQR+CKVFDAPNLPE+EAVFQIT G
Sbjct: 285 FVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESEAVFQITPG 338


>ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein DMC1
           homolog [Vitis vinifera]
          Length = 361

 Score =  321 bits (822), Expect = 5e-86
 Identities = 165/172 (95%), Positives = 167/172 (97%), Gaps = 1/172 (0%)
 Frame = -2

Query: 520 AYIDTEGTFRPDRIVAIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 341
           AYIDTEGTFRPDRIV IAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR
Sbjct: 164 AYIDTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR 223

Query: 340 LLIVDSVIALFRVDFTGR-ELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGV 164
           LLIVDSVIALFRVDFTGR ELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQVIADPGGGV
Sbjct: 224 LLIVDSVIALFRVDFTGRGELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGV 283

Query: 163 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAVFQIT 8
           FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEA+  IT
Sbjct: 284 FISDPKKPAGGHVLAHAATIRLMFRKGKGEQRVCKVFDAPNLPEAEAISLIT 335


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