BLASTX nr result

ID: Panax21_contig00036157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036157
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...   123   2e-26
emb|CBI18928.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   119   3e-25
emb|CAN63658.1| hypothetical protein VITISV_008414 [Vitis vinifera]   119   3e-25
ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25

>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/84 (70%), Positives = 71/84 (84%)
 Frame = +1

Query: 187 MLLSVFLALFLPCAGMSAVFLVYICLLWYAASTDDIQGELRSPEKPRAEKGLSAAELEKL 366
           MLLSVFLALFLPC GMSA+FL+YICLLWYAA+      E+ +P KP AEKGLSA++LEKL
Sbjct: 45  MLLSVFLALFLPCVGMSAIFLIYICLLWYAANHHH-HSEIVTPVKPSAEKGLSASDLEKL 103

Query: 367 PKMSGKDLVMGNECAVCLEEIGGE 438
           PKM+GK+L++G ECAVCL+EI  E
Sbjct: 104 PKMTGKELILGTECAVCLDEIESE 127


>emb|CBI18928.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/86 (70%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
 Frame = +1

Query: 175 KENK-MLLSVFLALFLPCAGMSAVFLVYICLLWYAASTDDIQGELRSPEKPRAEKGLSAA 351
           +ENK MLLS+FLALFLPCAGMS VF+VYICLLWY+A     Q EL +P KP +EKGLSA+
Sbjct: 29  RENKTMLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQ--QPELPAPVKPESEKGLSAS 86

Query: 352 ELEKLPKMSGKDLVMGNECAVCLEEI 429
           +L+KLPK++GKDLV+G ECAVCL+EI
Sbjct: 87  DLDKLPKLAGKDLVVGAECAVCLDEI 112


>ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23 [Vitis vinifera]
          Length = 129

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/81 (71%), Positives = 70/81 (86%)
 Frame = +1

Query: 187 MLLSVFLALFLPCAGMSAVFLVYICLLWYAASTDDIQGELRSPEKPRAEKGLSAAELEKL 366
           MLLS+FLALFLPCAGMS VF+VYICLLWY+A     Q EL +P KP +EKGLSA++L+KL
Sbjct: 1   MLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQ--QPELPAPVKPESEKGLSASDLDKL 58

Query: 367 PKMSGKDLVMGNECAVCLEEI 429
           PK++GKDLV+G ECAVCL+EI
Sbjct: 59  PKLAGKDLVVGAECAVCLDEI 79


>emb|CAN63658.1| hypothetical protein VITISV_008414 [Vitis vinifera]
          Length = 169

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/81 (71%), Positives = 70/81 (86%)
 Frame = +1

Query: 187 MLLSVFLALFLPCAGMSAVFLVYICLLWYAASTDDIQGELRSPEKPRAEKGLSAAELEKL 366
           MLLS+FLALFLPCAGMS VF+VYICLLWY+A     Q EL +P KP +EKGLSA++L+KL
Sbjct: 1   MLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQ--QPELPAPVKPESEKGLSASDLDKL 58

Query: 367 PKMSGKDLVMGNECAVCLEEI 429
           PK++GKDLV+G ECAVCL+EI
Sbjct: 59  PKLAGKDLVVGAECAVCLDEI 79


>ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|222856402|gb|EEE93949.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +1

Query: 187 MLLSVFLALFLPCAGMSAVFLVYICLLWYAASTDDIQGELRSPEKPRAEKGLSAAELEKL 366
           ML+SVFLALFLPCAGMSAVF+VYICLLWY A+    Q E+R P K   EKGLS++ELEKL
Sbjct: 1   MLVSVFLALFLPCAGMSAVFIVYICLLWYTANN---QPEIRLPVKTVTEKGLSSSELEKL 57

Query: 367 PKMSGKDLVMGNECAVCLEEIGGE 438
           PK++GK+LV+G ECAVCL++I  E
Sbjct: 58  PKVTGKELVLGTECAVCLDDIESE 81


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