BLASTX nr result

ID: Panax21_contig00036149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036149
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325861.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002319725.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004167656.1| PREDICTED: microfibrillar-associated protein...    93   3e-17
ref|XP_004144655.1| PREDICTED: microfibrillar-associated protein...    93   3e-17
ref|XP_002525686.1| microfibril-associated protein, putative [Ri...    91   1e-16

>ref|XP_002325861.1| predicted protein [Populus trichocarpa] gi|222862736|gb|EEF00243.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 59/118 (50%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
 Frame = +2

Query: 2   MQKYYHKGAFSSQIM-----------VFWIAISLP-----QQRRIR*MRAYYQRLCR*ST 133
           MQKYYHKGAF                +F    S P       + I       +   R   
Sbjct: 323 MQKYYHKGAFFQDEPDDRAATVGSDGIFKRDFSAPTGEDNMDKTILPKVMQVKHFGR--- 379

Query: 134 LVSGRTKCTHLANEDTTDWNGPWNYNDCLRAKYNAKLAGMKAATIERPKGSKRLKDRE 307
             SGRTK THL NEDTTDWN PW YND LRAKYNAK+AGM  ATI +PKGSK+LKD E
Sbjct: 380 --SGRTKWTHLVNEDTTDWNNPWTYNDPLRAKYNAKMAGMN-ATIAKPKGSKKLKDWE 434


>ref|XP_002319725.1| predicted protein [Populus trichocarpa] gi|222858101|gb|EEE95648.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 57/115 (49%), Positives = 69/115 (60%), Gaps = 13/115 (11%)
 Frame = +2

Query: 2   MQKYYHKGAF-----------SSQIMVFWIAISLP--QQRRIR*MRAYYQRLCR*STLVS 142
           MQKYYHKGAF           +    +F    S P  + R  + +     ++       S
Sbjct: 322 MQKYYHKGAFFQDQPDDRAATAGTDDIFRRDFSSPTGEDRMDKSILPKVMQVKHFGR--S 379

Query: 143 GRTKCTHLANEDTTDWNGPWNYNDCLRAKYNAKLAGMKAATIERPKGSKRLKDRE 307
           GRTK THL NEDTTDWN PW +ND LRAKYNAK+AGM AA I++PKGSK+LKD E
Sbjct: 380 GRTKWTHLVNEDTTDWNNPWTFNDPLRAKYNAKMAGMSAA-IDKPKGSKKLKDWE 433


>ref|XP_004167656.1| PREDICTED: microfibrillar-associated protein 1-like [Cucumis
           sativus]
          Length = 433

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/118 (49%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
 Frame = +2

Query: 2   MQKYYHKGAFSSQIM-----------VFWIAISLP-----QQRRIR*MRAYYQRLCR*ST 133
           MQKYYHKGAF  +             +F    S P       + I       +   R   
Sbjct: 320 MQKYYHKGAFFQEDADDNAGTAGSDNIFHRDFSSPTGEDKMDKTILPKVMQVKHFGR--- 376

Query: 134 LVSGRTKCTHLANEDTTDWNGPWNYNDCLRAKYNAKLAGMKAATIERPKGSKRLKDRE 307
             SGRTK THL NEDTTDWN PW YND LRAKYNAK+AGM  A I +PKGSK+LKD E
Sbjct: 377 --SGRTKWTHLVNEDTTDWNNPWTYNDPLRAKYNAKMAGMN-APITKPKGSKKLKDWE 431


>ref|XP_004144655.1| PREDICTED: microfibrillar-associated protein 1-like [Cucumis
           sativus]
          Length = 434

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/118 (49%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
 Frame = +2

Query: 2   MQKYYHKGAFSSQIM-----------VFWIAISLP-----QQRRIR*MRAYYQRLCR*ST 133
           MQKYYHKGAF  +             +F    S P       + I       +   R   
Sbjct: 321 MQKYYHKGAFFQEDADDNAGTAGSDNIFHRDFSSPTGEDKMDKTILPKVMQVKHFGR--- 377

Query: 134 LVSGRTKCTHLANEDTTDWNGPWNYNDCLRAKYNAKLAGMKAATIERPKGSKRLKDRE 307
             SGRTK THL NEDTTDWN PW YND LRAKYNAK+AGM  A I +PKGSK+LKD E
Sbjct: 378 --SGRTKWTHLVNEDTTDWNNPWTYNDPLRAKYNAKMAGMN-APITKPKGSKKLKDWE 432


>ref|XP_002525686.1| microfibril-associated protein, putative [Ricinus communis]
           gi|223534986|gb|EEF36669.1| microfibril-associated
           protein, putative [Ricinus communis]
          Length = 434

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/111 (48%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
 Frame = +2

Query: 2   MQKYYHKGAFSSQIMVFWIAISLPQQRRIR*MRAYYQRLCR*STLV-----------SGR 148
           MQKYYHKGAF         A +       R   A         +++           SGR
Sbjct: 321 MQKYYHKGAFFQNESNDHAATAASDNIYRRDFSAPTGEDKMDKSILPKVMQVKHFGRSGR 380

Query: 149 TKCTHLANEDTTDWNGPWNYNDCLRAKYNAKLAGMKAATIERPKGSKRLKD 301
           TK THL NEDTTDWN PW YND LRAKYN K+AGM  A I +PKGSK+LKD
Sbjct: 381 TKWTHLVNEDTTDWNNPWTYNDALRAKYNTKMAGMN-APIAKPKGSKKLKD 430


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