BLASTX nr result

ID: Panax21_contig00036109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036109
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]    70   1e-10
gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]             63   2e-08
ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Ara...    63   2e-08
gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]      63   2e-08
ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arab...    63   2e-08

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 KKSLKRKRALLVEGL-SKEERESQLGAMREELNGLYKYFNEVLEEKKNMGLDLCTSVNSV 45
           KKSLKRKR   V G  + E+R++++GA+R E+ GL++YF EV+ EK ++ +  C S+N+V
Sbjct: 23  KKSLKRKRISPVAGAPTVEDRKARIGALRAEMEGLFRYFEEVMGEKVDLEVGQCGSMNAV 82

Query: 44  IGCLLEGNSLPLSK 3
           +  LLE + LPLSK
Sbjct: 83  VAVLLEESRLPLSK 96


>gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]
          Length = 406

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -3

Query: 221 KKSLKRKRA-LLVEGLSKEERESQLGAMREELNGLYKYFNEVLEEKKN----MGLDLCTS 57
           KK  KRKR    +E L+ EE+ESQ+ ++  E+ GL+ YF EV+++ K      G   C+S
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 56  VNSVIGCLLEGNSLPLSK 3
           +NS++  L+E  SLPLSK
Sbjct: 80  LNSMVALLMEEMSLPLSK 97


>ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
           gi|332196259|gb|AEE34380.1| chromatin assembly factor-1
           (FASCIATA1) [Arabidopsis thaliana]
          Length = 807

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -3

Query: 221 KKSLKRKRA-LLVEGLSKEERESQLGAMREELNGLYKYFNEVLEEKKN----MGLDLCTS 57
           KK  KRKR    +E L+ EE+ESQ+ ++  E+ GL+ YF EV+++ K      G   C+S
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 56  VNSVIGCLLEGNSLPLSK 3
           +NS++  L+E  SLPLSK
Sbjct: 80  LNSMVALLMEEMSLPLSK 97


>gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]
          Length = 763

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -3

Query: 221 KKSLKRKRA-LLVEGLSKEERESQLGAMREELNGLYKYFNEVLEEKKN----MGLDLCTS 57
           KK  KRKR    +E L+ EE+ESQ+ ++  E+ GL+ YF EV+++ K      G   C+S
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 56  VNSVIGCLLEGNSLPLSK 3
           +NS++  L+E  SLPLSK
Sbjct: 80  LNSMVALLMEEMSLPLSK 97


>ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arabidopsis lyrata subsp.
           lyrata] gi|297334251|gb|EFH64669.1| hypothetical protein
           ARALYDRAFT_894101 [Arabidopsis lyrata subsp. lyrata]
          Length = 814

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -3

Query: 221 KKSLKRKRA-LLVEGLSKEERESQLGAMREELNGLYKYFNEVLEEKKNMGL----DLCTS 57
           KK  KRKR    VE L+ EE+E+Q+ ++  E+ GL+ YF EV+++ K   L      C+S
Sbjct: 20  KKPNKRKREPAAVENLTSEEKEAQISSLNLEMKGLFAYFREVMDQSKRTDLFSRFSECSS 79

Query: 56  VNSVIGCLLEGNSLPLSK 3
           VNS++  L+E  SLPLSK
Sbjct: 80  VNSMVALLMEEMSLPLSK 97


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