BLASTX nr result

ID: Panax21_contig00036101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036101
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526579.1| hypothetical protein RCOM_1603380 [Ricinus c...    48   2e-07

>ref|XP_002526579.1| hypothetical protein RCOM_1603380 [Ricinus communis]
           gi|223534073|gb|EEF35791.1| hypothetical protein
           RCOM_1603380 [Ricinus communis]
          Length = 661

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = -3

Query: 526 LLVSTCQVPKTFFHELVPSETVKVQLNPVINHNFLLPKLSSPTIIMR 386
           + VST Q  +TFFH+LVPS+TVK+ LNP    NF + K+     + R
Sbjct: 490 MFVSTRQAAETFFHQLVPSQTVKIHLNPETAENFSVEKVDMQAQVKR 536



 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = -1

Query: 342 VGVGKSLKPWRKM-ESPIGLIALILTHCLDMGD 247
           +G+ K ++PW+K+  + I +I ++L HCL MG+
Sbjct: 548 MGISKLIQPWKKIARTIICMIVILLLHCLYMGN 580


Top