BLASTX nr result

ID: Panax21_contig00036088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036088
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   226   2e-57
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   218   1e-54
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             206   3e-51
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   205   7e-51
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   205   7e-51

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  226 bits (577), Expect = 2e-57
 Identities = 110/198 (55%), Positives = 153/198 (77%)
 Frame = -2

Query: 594 NGIQPQLPRFSGKHFDQWCIQMNALFGFQELSETVELGYAEPVDQEAAAALTQVQKDSLS 415
           N +QPQLPRF GK++ +W  QM  L+G Q+L + V++GY+EP   E+   L+  Q + L 
Sbjct: 4   NMLQPQLPRFEGKNYRRWSQQMKVLYGSQDLWDIVDIGYSEP---ESENGLSAQQLNELR 60

Query: 414 NNRKKDKTALFFLYQAVDEVVFEKISSATTAKEAWEMLQKSYKGDEKVKSVRLQTLRGEF 235
           + RKKDK ALFF+YQ+VDE +FE+IS  +TAK AW+ LQ  Y+G+EKVK VRLQTLR EF
Sbjct: 61  DARKKDKKALFFIYQSVDENIFERISGVSTAKAAWDALQNLYEGEEKVKLVRLQTLRAEF 120

Query: 234 ESLKMKDSESISDYFSRVQYVVNQLRVNGEKKEDLRVIEKIMRSLTGRFDYVVAAIEEGR 55
           ++++MKDSE+I ++F+RV  +VNQLR NGE  ED R++EKI+RS+T R++++V AIEE +
Sbjct: 121 DTIRMKDSETIEEFFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESK 180

Query: 54  DLSTMTIEGLMGSLCAHE 1
           DLST++I  LMGSL +HE
Sbjct: 181 DLSTLSINSLMGSLQSHE 198


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  218 bits (554), Expect = 1e-54
 Identities = 107/198 (54%), Positives = 149/198 (75%)
 Frame = -2

Query: 594 NGIQPQLPRFSGKHFDQWCIQMNALFGFQELSETVELGYAEPVDQEAAAALTQVQKDSLS 415
           N +Q QLPRFSGK+F+QW IQM  L+G QEL + VE GY E  +Q   + LT  Q   L 
Sbjct: 6   NMLQHQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQ---SELTNQQLVELR 62

Query: 414 NNRKKDKTALFFLYQAVDEVVFEKISSATTAKEAWEMLQKSYKGDEKVKSVRLQTLRGEF 235
            NR KDK ALFF+YQAVDE + E+IS+AT+AK AW++L+ +Y+G++KVK +RLQ LR EF
Sbjct: 63  ENRNKDKKALFFIYQAVDEFISERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRSEF 122

Query: 234 ESLKMKDSESISDYFSRVQYVVNQLRVNGEKKEDLRVIEKIMRSLTGRFDYVVAAIEEGR 55
           + +KMK++E+I ++F+ +  +VN LR NGE+  D RV+EKI+RS+  +F+++V AIEE +
Sbjct: 123 DCIKMKETETIEEFFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESK 182

Query: 54  DLSTMTIEGLMGSLCAHE 1
           DLST++I  LMGSL +HE
Sbjct: 183 DLSTLSINSLMGSLQSHE 200


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  206 bits (524), Expect = 3e-51
 Identities = 103/198 (52%), Positives = 143/198 (72%)
 Frame = -2

Query: 594 NGIQPQLPRFSGKHFDQWCIQMNALFGFQELSETVELGYAEPVDQEAAAALTQVQKDSLS 415
           N +  Q+P  +  ++D W +QM A+ G  ++ E VE G+ EP   E   +L+Q QKD L 
Sbjct: 4   NNVPFQVPVLTKSNYDNWSLQMKAILGAHDVWEIVEKGFIEP---ENEGSLSQTQKDGLR 60

Query: 414 NNRKKDKTALFFLYQAVDEVVFEKISSATTAKEAWEMLQKSYKGDEKVKSVRLQTLRGEF 235
           ++RK+DK AL  +YQ +DE  FEK+  AT+AKEAWE L+ SYKG ++VK VRLQTLRGEF
Sbjct: 61  DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGEF 120

Query: 234 ESLKMKDSESISDYFSRVQYVVNQLRVNGEKKEDLRVIEKIMRSLTGRFDYVVAAIEEGR 55
           E+L+MK+ E +SDYFSRV  V N L+ NGEK +D+R++EK++RSL  +F+++V  IEE +
Sbjct: 121 EALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETK 180

Query: 54  DLSTMTIEGLMGSLCAHE 1
           DL  MTIE L+GSL A+E
Sbjct: 181 DLEAMTIEQLLGSLQAYE 198


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  205 bits (521), Expect = 7e-51
 Identities = 102/198 (51%), Positives = 143/198 (72%)
 Frame = -2

Query: 594 NGIQPQLPRFSGKHFDQWCIQMNALFGFQELSETVELGYAEPVDQEAAAALTQVQKDSLS 415
           N +  Q+P  +  ++D W ++M A+ G  ++ E VE G+ EP   E   +L+Q QKD L 
Sbjct: 4   NNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEP---ENEGSLSQTQKDGLR 60

Query: 414 NNRKKDKTALFFLYQAVDEVVFEKISSATTAKEAWEMLQKSYKGDEKVKSVRLQTLRGEF 235
           ++RK+DK AL  +YQ +DE  FEK+  AT+AKEAWE L+ SYKG ++VK VRLQTLRGEF
Sbjct: 61  DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 234 ESLKMKDSESISDYFSRVQYVVNQLRVNGEKKEDLRVIEKIMRSLTGRFDYVVAAIEEGR 55
           E+L+MK+ E +SDYFSRV  V N L+ NGEK +D+R++EK++RSL  +F+++V  IEE +
Sbjct: 121 EALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETK 180

Query: 54  DLSTMTIEGLMGSLCAHE 1
           DL  MTIE L+GSL A+E
Sbjct: 181 DLEAMTIEQLLGSLQAYE 198


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  205 bits (521), Expect = 7e-51
 Identities = 102/198 (51%), Positives = 143/198 (72%)
 Frame = -2

Query: 594 NGIQPQLPRFSGKHFDQWCIQMNALFGFQELSETVELGYAEPVDQEAAAALTQVQKDSLS 415
           N +  Q+P  +  ++D W ++M A+ G  ++ E VE G+ EP   E   +L+Q QKD L 
Sbjct: 4   NNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEP---ENEGSLSQTQKDGLR 60

Query: 414 NNRKKDKTALFFLYQAVDEVVFEKISSATTAKEAWEMLQKSYKGDEKVKSVRLQTLRGEF 235
           ++RK+DK AL  +YQ +DE  FEK+  AT+AKEAWE L+ SYKG ++VK VRLQTLRGEF
Sbjct: 61  DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 234 ESLKMKDSESISDYFSRVQYVVNQLRVNGEKKEDLRVIEKIMRSLTGRFDYVVAAIEEGR 55
           E+L+MK+ E +SDYFSRV  V N L+ NGEK +D+R++EK++RSL  +F+++V  IEE +
Sbjct: 121 EALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETK 180

Query: 54  DLSTMTIEGLMGSLCAHE 1
           DL  MTIE L+GSL A+E
Sbjct: 181 DLEAMTIEQLLGSLQAYE 198


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