BLASTX nr result

ID: Panax21_contig00036087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036087
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   198   3e-49
ref|XP_002305651.1| f-box family protein [Populus trichocarpa] g...   188   4e-46
ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   184   6e-45
ref|XP_003532560.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   183   1e-44
ref|XP_003608251.1| Protein AUXIN SIGNALING F-BOX [Medicago trun...   181   4e-44

>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  198 bits (504), Expect = 3e-49
 Identities = 102/135 (75%), Positives = 110/135 (81%)
 Frame = -2

Query: 405 CKSLRVLNINKSITLEQLQRLLLTAPQLMALGTGSFQQELVPHQFTELESAFNNCKNLHT 226
           C+SL+ L +NK+ITLEQLQRLL  APQL  LGTGSF QEL   Q+ ELESAFNNCKNL+T
Sbjct: 222 CRSLKFLKVNKNITLEQLQRLLECAPQLTELGTGSFHQELTTRQYAELESAFNNCKNLNT 281

Query: 225 LSGLWEASNSLYLPVLYPACAILTFLNLSYATLQIGEFAKLLVHCSNLRRLWVQDTVEDT 46
           LSGLWEA+  LYLPVLYPAC  LTFLNLS A LQ GE AKLL  C NL+RLWV DTVED 
Sbjct: 282 LSGLWEAT-PLYLPVLYPACMNLTFLNLSDAALQSGELAKLLARCPNLQRLWVLDTVEDK 340

Query: 45  GLEAVGYSCPLLEEL 1
           GLEAVG SCPLLEEL
Sbjct: 341 GLEAVGLSCPLLEEL 355


>ref|XP_002305651.1| f-box family protein [Populus trichocarpa]
           gi|222848615|gb|EEE86162.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score =  188 bits (477), Expect = 4e-46
 Identities = 97/135 (71%), Positives = 106/135 (78%)
 Frame = -2

Query: 405 CKSLRVLNINKSITLEQLQRLLLTAPQLMALGTGSFQQELVPHQFTELESAFNNCKNLHT 226
           CKSL+VL +NKSI+LE LQRLL+ APQL  LGTGSF  EL   Q+ ELESAFN CKNLHT
Sbjct: 215 CKSLKVLKVNKSISLEHLQRLLVCAPQLTELGTGSFTPELTTRQYAELESAFNQCKNLHT 274

Query: 225 LSGLWEASNSLYLPVLYPACAILTFLNLSYATLQIGEFAKLLVHCSNLRRLWVQDTVEDT 46
           LSGLWEA+ +LYLPVLYP C+ LTFLNLSY  LQ  E A LL  C  LRRLWV DTV D 
Sbjct: 275 LSGLWEAT-ALYLPVLYPVCSNLTFLNLSYTFLQSLELASLLRQCPRLRRLWVLDTVGDK 333

Query: 45  GLEAVGYSCPLLEEL 1
           GLEAVG +CPLLEEL
Sbjct: 334 GLEAVGSNCPLLEEL 348


>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 589

 Score =  184 bits (467), Expect = 6e-45
 Identities = 94/134 (70%), Positives = 106/134 (79%)
 Frame = -2

Query: 402 KSLRVLNINKSITLEQLQRLLLTAPQLMALGTGSFQQELVPHQFTELESAFNNCKNLHTL 223
           KSL+VL +NK+I+LEQLQRLL   PQL  LGTGSF QEL   QFTE+E+ F++CKNL TL
Sbjct: 226 KSLKVLKVNKNISLEQLQRLLACTPQLTELGTGSFSQELTARQFTEVENTFSHCKNLDTL 285

Query: 222 SGLWEASNSLYLPVLYPACAILTFLNLSYATLQIGEFAKLLVHCSNLRRLWVQDTVEDTG 43
           SGLWEA  + YLPVLYPAC  LTFLNLSYA LQ  E A LL HC  LRRLWV DT+ED G
Sbjct: 286 SGLWEAM-APYLPVLYPACTNLTFLNLSYAALQSLELANLLRHCPQLRRLWVLDTIEDKG 344

Query: 42  LEAVGYSCPLLEEL 1
           LE+VG +CPLLEEL
Sbjct: 345 LESVGSNCPLLEEL 358


>ref|XP_003532560.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Glycine
           max]
          Length = 578

 Score =  183 bits (464), Expect = 1e-44
 Identities = 93/135 (68%), Positives = 104/135 (77%)
 Frame = -2

Query: 405 CKSLRVLNINKSITLEQLQRLLLTAPQLMALGTGSFQQELVPHQFTELESAFNNCKNLHT 226
           CKSL+ L +NKS+TLEQLQRLL+  PQL  LGTGSF QEL   Q ++LESAF NC+NLHT
Sbjct: 217 CKSLKTLKVNKSVTLEQLQRLLVHVPQLGELGTGSFSQELTAQQCSDLESAFKNCRNLHT 276

Query: 225 LSGLWEASNSLYLPVLYPACAILTFLNLSYATLQIGEFAKLLVHCSNLRRLWVQDTVEDT 46
           LSGLW A+ + YLPVLY AC  LTFLN SYA L     AKLLVHC  L+R+WV DTVED 
Sbjct: 277 LSGLWVAT-AQYLPVLYSACTNLTFLNFSYAPLDSDGLAKLLVHCPKLQRIWVVDTVEDK 335

Query: 45  GLEAVGYSCPLLEEL 1
           GLEAVG  CPLLEEL
Sbjct: 336 GLEAVGSHCPLLEEL 350


>ref|XP_003608251.1| Protein AUXIN SIGNALING F-BOX [Medicago truncatula]
           gi|355509306|gb|AES90448.1| Protein AUXIN SIGNALING
           F-BOX [Medicago truncatula]
          Length = 586

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/135 (68%), Positives = 103/135 (76%)
 Frame = -2

Query: 405 CKSLRVLNINKSITLEQLQRLLLTAPQLMALGTGSFQQELVPHQFTELESAFNNCKNLHT 226
           C SL+ L +NKS+TLEQLQRLL+ APQL  LGTGSF QEL   Q++ELE AFNNC++LHT
Sbjct: 225 CNSLKTLKVNKSVTLEQLQRLLVRAPQLCELGTGSFSQELTGQQYSELERAFNNCRSLHT 284

Query: 225 LSGLWEASNSLYLPVLYPACAILTFLNLSYATLQIGEFAKLLVHCSNLRRLWVQDTVEDT 46
           LSGLW AS + Y  VLYP C  LTFLN SYA L     +KLLV C NLRRLWV DTVED 
Sbjct: 285 LSGLWVAS-AQYHQVLYPVCTNLTFLNFSYAPLDSEGLSKLLVRCPNLRRLWVLDTVEDK 343

Query: 45  GLEAVGYSCPLLEEL 1
           GLEAVG  CPLLEEL
Sbjct: 344 GLEAVGSYCPLLEEL 358


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