BLASTX nr result

ID: Panax21_contig00036074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036074
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...   183   2e-54
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...   176   5e-52
ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i...   176   5e-52
ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis...   180   2e-50
emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]   179   3e-50

>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
           gi|223544730|gb|EEF46246.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 494

 Score =  183 bits (465), Expect(2) = 2e-54
 Identities = 87/113 (76%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = +2

Query: 149 LYSLLWILAFASVFIWQRNIV-DGLSIFRRSGPVREMPRLRPVAFNLTDFGGVGDGVTLN 325
           L+++LWI AFASVF+WQRN+V DG ++F ++ P+R MP+LRPVAFNLTDFGGVGDGVTLN
Sbjct: 32  LFTVLWIAAFASVFVWQRNVVGDGFAVFFKASPMRPMPKLRPVAFNLTDFGGVGDGVTLN 91

Query: 326 TEAFERAVFAISKYTKKGGAQLNVPAGNWLTAPFNLTSHMTLFLAEDAVILGI 484
           TEAFERAV AISK  KKGG QLNVP G W+TAPFNLTSHMTLFLAED++ILGI
Sbjct: 92  TEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTSHMTLFLAEDSIILGI 144



 Score = 53.9 bits (128), Expect(2) = 2e-54
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +1

Query: 58  MMMETVTPSSFHHNRLEFRRWIPTFFSSHRTLFTPL 165
           MM+ET +    H+ RLE +RW+PTFFSSH+TLFT L
Sbjct: 1   MMLETASLGRLHYQRLELKRWVPTFFSSHKTLFTVL 36


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score =  176 bits (447), Expect(2) = 5e-52
 Identities = 89/112 (79%), Positives = 96/112 (85%)
 Frame = +2

Query: 149 LYSLLWILAFASVFIWQRNIVDGLSIFRRSGPVREMPRLRPVAFNLTDFGGVGDGVTLNT 328
           L +LLWI AFASVF+WQRNIV G  ++    P R MP LRP+AFNLTDFGGVGDGVTLNT
Sbjct: 32  LLTLLWIAAFASVFLWQRNIVGGFLVYGGI-PGRPMPMLRPMAFNLTDFGGVGDGVTLNT 90

Query: 329 EAFERAVFAISKYTKKGGAQLNVPAGNWLTAPFNLTSHMTLFLAEDAVILGI 484
           EAFERAV A+SK+ KKGGAQLNVP G WLTAPFNLTSHMTLFLAEDAVILGI
Sbjct: 91  EAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAEDAVILGI 142



 Score = 53.1 bits (126), Expect(2) = 5e-52
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = +1

Query: 58  MMMETVTPSSFHHNRLEFRRWIPTFFSSHRTLFTPL 165
           MM+ET T   FHH RL+ RRW+P FF+SH+TL T L
Sbjct: 1   MMVETSTLGHFHHQRLDLRRWVPAFFTSHKTLLTLL 36


>ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
          Length = 491

 Score =  176 bits (447), Expect(2) = 5e-52
 Identities = 89/112 (79%), Positives = 96/112 (85%)
 Frame = +2

Query: 149 LYSLLWILAFASVFIWQRNIVDGLSIFRRSGPVREMPRLRPVAFNLTDFGGVGDGVTLNT 328
           L +LLWI AFASVF+WQRNIV G  ++    P R MP LRP+AFNLTDFGGVGDGVTLNT
Sbjct: 32  LLTLLWIAAFASVFLWQRNIVGGFLVYGGI-PGRPMPMLRPMAFNLTDFGGVGDGVTLNT 90

Query: 329 EAFERAVFAISKYTKKGGAQLNVPAGNWLTAPFNLTSHMTLFLAEDAVILGI 484
           EAFERAV A+SK+ KKGGAQLNVP G WLTAPFNLTSHMTLFLAEDAVILGI
Sbjct: 91  EAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSHMTLFLAEDAVILGI 142



 Score = 53.1 bits (126), Expect(2) = 5e-52
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = +1

Query: 58  MMMETVTPSSFHHNRLEFRRWIPTFFSSHRTLFTPL 165
           MM+ET T   FHH RL+ RRW+P FF+SH+TL T L
Sbjct: 1   MMVETSTLGHFHHQRLDLRRWVPAFFTSHKTLLTLL 36


>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
           gi|297738532|emb|CBI27777.3| unnamed protein product
           [Vitis vinifera]
          Length = 493

 Score =  180 bits (456), Expect(2) = 2e-50
 Identities = 87/112 (77%), Positives = 98/112 (87%)
 Frame = +2

Query: 149 LYSLLWILAFASVFIWQRNIVDGLSIFRRSGPVREMPRLRPVAFNLTDFGGVGDGVTLNT 328
           L+++LWI AFASVF+WQRNIV+GL  FRR+ P R +PRLRP  +NLTDFGGVGD VT+NT
Sbjct: 33  LFTILWIAAFASVFVWQRNIVEGLLTFRRA-PARPLPRLRPAVYNLTDFGGVGDSVTVNT 91

Query: 329 EAFERAVFAISKYTKKGGAQLNVPAGNWLTAPFNLTSHMTLFLAEDAVILGI 484
           EAFERA+ AISK  KKGG QLNVPAGNWLTAPFNLTSHMTLFL +DAVILGI
Sbjct: 92  EAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLFLDQDAVILGI 143



 Score = 44.3 bits (103), Expect(2) = 2e-50
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  MMETVTPSSFH--HNRLEFRRWIPTFFSSHRTLFTPL 165
           M+ET +   FH  H+R + +RWIP F SSHRTLFT L
Sbjct: 1   MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTIL 37


>emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
          Length = 509

 Score =  179 bits (455), Expect(2) = 3e-50
 Identities = 87/112 (77%), Positives = 98/112 (87%)
 Frame = +2

Query: 149 LYSLLWILAFASVFIWQRNIVDGLSIFRRSGPVREMPRLRPVAFNLTDFGGVGDGVTLNT 328
           L+++LWI AFASVF+WQRNIV+GL  FRR+ P R +PRLRP  +NLTDFGGVGD VT+NT
Sbjct: 33  LFTILWIAAFASVFVWQRNIVEGLLTFRRA-PARPLPRLRPAVYNLTDFGGVGDXVTVNT 91

Query: 329 EAFERAVFAISKYTKKGGAQLNVPAGNWLTAPFNLTSHMTLFLAEDAVILGI 484
           EAFERA+ AISK  KKGG QLNVPAGNWLTAPFNLTSHMTLFL +DAVILGI
Sbjct: 92  EAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMTLFLDQDAVILGI 143



 Score = 44.3 bits (103), Expect(2) = 3e-50
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  MMETVTPSSFH--HNRLEFRRWIPTFFSSHRTLFTPL 165
           M+ET +   FH  H+R + +RWIP F SSHRTLFT L
Sbjct: 1   MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTIL 37


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