BLASTX nr result

ID: Panax21_contig00036028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036028
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593767.1| U-box domain-containing protein [Medicago tr...    71   1e-10
ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7...    70   2e-10
ref|XP_003546026.1| PREDICTED: U-box domain-containing protein 7...    69   3e-10
ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus ...    69   3e-10

>ref|XP_003593767.1| U-box domain-containing protein [Medicago truncatula]
           gi|355482815|gb|AES64018.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 440

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/54 (62%), Positives = 46/54 (85%)
 Frame = +2

Query: 2   NHKEVSQGKKLMKNMVKQSLYKNMESMARRANGDEGSSKLKFLVISSSSKSLPY 163
           N ++ ++GKKLMK++VKQSL+KN+E + +RAN +  SSKLK LVIS+SSKSLPY
Sbjct: 387 NQRDTNEGKKLMKSLVKQSLHKNLEIITQRANANGESSKLKSLVISTSSKSLPY 440


>ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|222859894|gb|EEE97441.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +2

Query: 2   NHKEVSQGKKLMKNMVKQSLYKNMESMARRANGDEG-SSKLKFLVISSSSKSLP 160
           NH E  +GKKLMK++VKQSL+KNME + RRAN   G SS LK LVIS+SSKSLP
Sbjct: 371 NHSEAQEGKKLMKDLVKQSLHKNMELITRRANATSGHSSMLKSLVISTSSKSLP 424


>ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7 [Vitis vinifera]
           gi|297740492|emb|CBI30674.3| unnamed protein product
           [Vitis vinifera]
          Length = 431

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/54 (66%), Positives = 41/54 (75%)
 Frame = +2

Query: 2   NHKEVSQGKKLMKNMVKQSLYKNMESMARRANGDEGSSKLKFLVISSSSKSLPY 163
           N +E  +GKKLMK MVKQSL KNME + RRAN    +S LK LVIS+SSKSLPY
Sbjct: 378 NQRETLEGKKLMKTMVKQSLNKNMEMITRRANAATAASTLKTLVISTSSKSLPY 431


>ref|XP_003546026.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 436

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/54 (61%), Positives = 45/54 (83%)
 Frame = +2

Query: 2   NHKEVSQGKKLMKNMVKQSLYKNMESMARRANGDEGSSKLKFLVISSSSKSLPY 163
           N +E  +GK+LMK++VKQSL++NME +A+RAN    SS+LK L+IS+SSKSLPY
Sbjct: 383 NQREAKEGKRLMKSLVKQSLHRNMEIIAQRANAAGESSRLKSLIISTSSKSLPY 436


>ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538255|gb|EEF39864.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 439

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/55 (67%), Positives = 43/55 (78%), Gaps = 7/55 (12%)
 Frame = +2

Query: 20  QGKKLMKNMVKQSLYKNMESMARRANGD-------EGSSKLKFLVISSSSKSLPY 163
           +GKK+MKN+VKQSLYKNME + RRAN +       E SSKLK LVIS+SSKSLPY
Sbjct: 385 EGKKMMKNLVKQSLYKNMEMITRRANNNSNDSSSGESSSKLKSLVISTSSKSLPY 439


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