BLASTX nr result

ID: Panax21_contig00036020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036020
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43804.1| unknown [Lotus japonicus]                               91   2e-16
ref|XP_002528192.1| conserved hypothetical protein [Ricinus comm...    90   3e-16
ref|XP_002284754.1| PREDICTED: protein SYS1 homolog [Vitis vinif...    89   7e-16
ref|XP_004141851.1| PREDICTED: protein SYS1 homolog [Cucumis sat...    87   4e-15
ref|XP_002304184.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15

>gb|AFK43804.1| unknown [Lotus japonicus]
          Length = 152

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = -3

Query: 652 GWPSSITWWVVNGTGLAVMALLGEYLCIRRELQEIPITRYRSNV 521
           GWPS+ITWW+VNGTG+AVMALLGEYLCIRRELQEIPITR RSNV
Sbjct: 109 GWPSAITWWIVNGTGIAVMALLGEYLCIRRELQEIPITRLRSNV 152


>ref|XP_002528192.1| conserved hypothetical protein [Ricinus communis]
           gi|223532404|gb|EEF34199.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = -3

Query: 652 GWPSSITWWVVNGTGLAVMALLGEYLCIRRELQEIPITRYRSNV 521
           GWPSS+TWWVV+GTGLAVMALLGEYLCIRREL+EIPITRYRS V
Sbjct: 67  GWPSSVTWWVVSGTGLAVMALLGEYLCIRRELKEIPITRYRSRV 110


>ref|XP_002284754.1| PREDICTED: protein SYS1 homolog [Vitis vinifera]
           gi|297743295|emb|CBI36162.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -3

Query: 652 GWPSSITWWVVNGTGLAVMALLGEYLCIRRELQEIPITRYRSNV 521
           GWPSSITWWVVNGT LA+MALLGEYLCIRREL EIPITRYRSNV
Sbjct: 109 GWPSSITWWVVNGTCLAMMALLGEYLCIRRELLEIPITRYRSNV 152


>ref|XP_004141851.1| PREDICTED: protein SYS1 homolog [Cucumis sativus]
           gi|449522538|ref|XP_004168283.1| PREDICTED: protein SYS1
           homolog [Cucumis sativus]
          Length = 151

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = -3

Query: 652 GWPSSITWWVVNGTGLAVMALLGEYLCIRRELQEIPITRYRSNV 521
           GWPSS+TWWVVNGTGL VM+LLGEYLCI+REL+EIPITR RSNV
Sbjct: 108 GWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 151


>ref|XP_002304184.1| predicted protein [Populus trichocarpa] gi|222841616|gb|EEE79163.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = -3

Query: 652 GWPSSITWWVVNGTGLAVMALLGEYLCIRRELQEIPITRYRSNV 521
           GWPSSITWWVVNGTG AVMALLGEYLCI+REL+EIP TRYRSNV
Sbjct: 109 GWPSSITWWVVNGTGFAVMALLGEYLCIKRELREIP-TRYRSNV 151


Top