BLASTX nr result

ID: Panax21_contig00036016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036016
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329370.1| AP2/ERF domain-containing transcription fact...   132   7e-29
ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription...   129   5e-28
ref|XP_002319909.1| AP2/ERF domain-containing transcription fact...   120   3e-25
gb|AFJ14638.1| dehydration-responsive element-binding protein (D...    96   6e-18
ref|XP_003526286.1| PREDICTED: ethylene-responsive transcription...    95   1e-17

>ref|XP_002329370.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222870420|gb|EEF07551.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 464

 Score =  132 bits (331), Expect = 7e-29
 Identities = 79/173 (45%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
 Frame = +3

Query: 6   KDRTVSSAPNSS---SPTPRSSKQPEQAPEFLNLMDSNTELPPEA---------DDSGFG 149
           K++  S+AP+SS    PTP  S  P+QA E +NL       PP           DDSG G
Sbjct: 294 KEKETSTAPSSSVSSPPTPNQSSMPKQAQEGINLQVETMPPPPPPEQPQGDHPDDDSGLG 353

Query: 150 SSDITVGEEVQTNVGSCGTGEGVSESFELVWGDMGADWFDAIPAGWVTGSPAWDDLETTN 329
           SS  TV +EVQ  VGS   GEG S S EL+WGDM   W++AI AGW  GSP WDDL+TTN
Sbjct: 354 SSGATVSDEVQA-VGS-SAGEGTSGSQELMWGDMAEAWYNAIQAGWGPGSPVWDDLDTTN 411

Query: 330 NLFMPSNLCFGNAQHQEFY-NPDSQNQQDD--XXXXXXXXXFPMNPFLWKNQD 479
           N  + S+L F     Q+F  + D Q QQD+           FP  PF WK+QD
Sbjct: 412 NFLLQSHLPFVTPNQQQFTDSSDLQRQQDNMGSASSSSSSSFPTKPFFWKDQD 464


>ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription factor ERF054-like
           [Vitis vinifera]
          Length = 465

 Score =  129 bits (324), Expect = 5e-28
 Identities = 86/186 (46%), Positives = 103/186 (55%), Gaps = 28/186 (15%)
 Frame = +3

Query: 6   KDRTVSSAPNSSS---PTP-------RSSKQPEQAPEFLNLMDSNTE-LPPEADDSGF-- 146
           KD+  S+AP+SSS   PTP       RS  QP+QAPE LNL DS    LPP A   G+  
Sbjct: 281 KDKAGSTAPSSSSSSPPTPHENSLWGRSQNQPQQAPEGLNLQDSEVGMLPPPAPSPGYDS 340

Query: 147 --------GSSDITV-GEEVQTNVGSCGTGEGVSESF-ELVWGDMGADWFDAIPAGWVTG 296
                   GSS+     +EVQ    S   GE VSES  E VWG+M   WF+AIPAGW  G
Sbjct: 341 NNELGLVLGSSEAAARNDEVQK---SSNAGESVSESPPESVWGEMAEAWFNAIPAGWGPG 397

Query: 297 SPAWDDLETTNNLFMPSNLCFGNA----QHQEFYNPDSQNQQDD-XXXXXXXXXFPMNPF 461
           S  WDDL+T+NNL + SN+ FGNA    Q Q F +PD   QQD+           PM PF
Sbjct: 398 SAVWDDLDTSNNLLLQSNVHFGNAHQQQQQQAFNDPDYGRQQDNLDSASSSSSSCPMRPF 457

Query: 462 LWKNQD 479
            W++QD
Sbjct: 458 FWRDQD 463


>ref|XP_002319909.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372108|gb|ABQ62985.1| RAP2-like
           protein [Populus trichocarpa]
           gi|222858285|gb|EEE95832.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 469

 Score =  120 bits (300), Expect = 3e-25
 Identities = 74/177 (41%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
 Frame = +3

Query: 6   KDRTVSSAPNS---SSPTPRSSKQPEQAPEFLNLMDSNTE---LPPEA-----------D 134
           KD+  S+AP+S   S PT   S +P+QA E LNL         LPP+            D
Sbjct: 294 KDKATSTAPSSTVSSPPTSNQSLKPKQAQEGLNLQAETMSPPILPPQPPPEQPPGDHPDD 353

Query: 135 DSGFGSSDITVGEEVQTNVGSCGTGEGVSESFELVWGDMGADWFDAIPAGWVTGSPAWDD 314
           DSG GSS  TV +E+Q        GEG+S S EL WGDM   W++AI AGW  GSP WDD
Sbjct: 354 DSGMGSSGATVSDEIQAVAEGSSAGEGISGSQELEWGDMAEAWYNAIQAGWGPGSPVWDD 413

Query: 315 LETTNNLFMPSNLCFGNAQHQEFYNPDSQNQQDD--XXXXXXXXXFPMNPFLWKNQD 479
           L++TNNL + S+L F N   Q+F N      QD+           FPM  +  K+QD
Sbjct: 414 LDSTNNLLLQSHLPFVNPNQQQF-NDSCCVLQDNMGSASSSSSSFFPMKSYFLKDQD 469


>gb|AFJ14638.1| dehydration-responsive element-binding protein (DREB6), partial
           [Malus x domestica]
          Length = 450

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 27/184 (14%)
 Frame = +3

Query: 9   DRTVSSAPNSSSPTP---------RSSKQPEQAPEFLNLMDSNTE-LPPEA--------- 131
           D +VSSAP+S++ +P         R+ KQP++    +    SN E +PP           
Sbjct: 275 DVSVSSAPSSAATSPPRHEGSKPTRNRKQPQK----IKSSASNIEAMPPPPIPHTQEENS 330

Query: 132 --DDSGFGSSDITVGEEVQTNVGSCGTGEGVSESFELVWGDMGADWFDAIPAGWVTGSPA 305
             +DSG  S++    +EV+ N+   G G G S+  E+VWGDM  DW +AIPAGW  GSP 
Sbjct: 331 PDNDSGLESNEAKAIDEVEVNID--GAGGGSSQQKEIVWGDMAEDWLNAIPAGWGPGSPV 388

Query: 306 WDDLETTNNLFMPSNLCFGNAQHQEF---YNPDSQNQQD---DXXXXXXXXXFPMNPFLW 467
           WDDL+  NNL + S+L F N   Q++    NP    Q               +P     W
Sbjct: 389 WDDLD--NNLLLQSHLPFTNPNQQDYNININPQQAIQNSGSGSGSGSSSSSSYPTKNLFW 446

Query: 468 KNQD 479
           K+QD
Sbjct: 447 KDQD 450


>ref|XP_003526286.1| PREDICTED: ethylene-responsive transcription factor ERF054-like
           [Glycine max]
          Length = 415

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 60/153 (39%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
 Frame = +3

Query: 21  SSAPNSSSPTPRSSKQPEQAPEFLNLMDSNTELPPEADDSGFGSSDITVGEEVQTNVGSC 200
           SS   S+S + +++KQPE  PE +N    + ++PP            T+ EE      + 
Sbjct: 284 SSNEGSTSTSSQNTKQPEPIPEEINT--ESEDIPPTE----------TIAEE------NA 325

Query: 201 GTGEGVSESFELVWGDMGADWFDAIPAGWVTGSPAWDDLETTNNLFMPSNLCFGNAQHQE 380
            TG+G+S+  ELVWG+    WF+AIPAGW  GSP WDDL+  NNL + S L F N   QE
Sbjct: 326 ETGKGISQPQELVWGE----WFNAIPAGWGPGSPVWDDLDPNNNLLLHSQLPFVNPNQQE 381

Query: 381 FYN---PDSQNQQDD---XXXXXXXXXFPMNPF 461
           F++     SQ QQ+D            FPM PF
Sbjct: 382 FHDDAGASSQIQQEDNSTEPGSSSSPSFPMRPF 414


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