BLASTX nr result

ID: Panax21_contig00036010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00036010
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...   140   1e-31
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...   125   4e-27
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...   125   5e-27
ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  140 bits (354), Expect = 1e-31
 Identities = 82/186 (44%), Positives = 119/186 (63%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3    LDLSGNPILSLPDCVRNISSLKNLYLNSCKSLKNVLGLP-SVENLRVGGCTPLQRITYKS 179
            LDL GNPI S+P+ + ++++L+ L L+ C  L+++  LP S+E L+  GCT L+RIT   
Sbjct: 759  LDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERITN-- 816

Query: 180  ASFLPSLL-----EHTYCSDLDEIQSVFKLEPIEEVDRELINSLGWFDVTTMGNLEVNLY 344
               LP+LL     E   C  L E+Q +FKLEP   +D E++N LG  + +T+G+ E+ ++
Sbjct: 817  ---LPNLLSTLQVELFGCGQLVEVQGLFKLEPTINMDIEMMNGLGLHNFSTLGSSEMKMF 873

Query: 345  NPCSSIKKR-PIQGMYEFGIFNTFLPGREVPGWFSEKRMGSSISFTVPPLPDNLKIQGLN 521
            +  ++ + R P Q + E GI + FL G EVP WF  K  GSS+SFT+ PL D  KI+GLN
Sbjct: 874  SAIANREMRSPPQVLQECGIVSFFLAGNEVPHWFDHKSTGSSLSFTINPLSD-YKIRGLN 932

Query: 522  LCLVYA 539
            LC VYA
Sbjct: 933  LCTVYA 938


>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  135 bits (340), Expect = 4e-30
 Identities = 76/185 (41%), Positives = 118/185 (63%), Gaps = 7/185 (3%)
 Frame = +3

Query: 3   LDLSGNPILSLPDCVRNISSLKNLYLNSCKSLKNVLGLP-SVENLRVGGCTPLQRITYKS 179
           L+LS NPI +LP+ + ++S L++L LN C+SL+++  LP S++ LR   CT L+RI    
Sbjct: 148 LNLSKNPIQTLPESMNSLSMLQDLLLNHCRSLRSLPELPTSLKKLRAEKCTKLERIAN-- 205

Query: 180 ASFLPSLLEHTY-----CSDLDEIQSVFKLEPIEEVDRELINSLGWFDVTTMGNLEVNLY 344
              LP+LL         C  L ++Q +F LE + E D ++I +L  F++ ++G++EV + 
Sbjct: 206 ---LPNLLRSLRLNLIGCKRLVQVQGLFNLEMMREFDAKMIYNLHLFNIESLGSIEVEMI 262

Query: 345 NPCSSIKK-RPIQGMYEFGIFNTFLPGREVPGWFSEKRMGSSISFTVPPLPDNLKIQGLN 521
           N  +   +   +Q + E GIF+ FLPG EVP W+S ++  +S+SF VPPLP   KI+GLN
Sbjct: 263 NSITKTSRITRLQILQEQGIFSIFLPGSEVPSWYSHQKQNNSVSFAVPPLPSR-KIRGLN 321

Query: 522 LCLVY 536
           LC+VY
Sbjct: 322 LCIVY 326


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score =  125 bits (314), Expect = 4e-27
 Identities = 71/183 (38%), Positives = 115/183 (62%), Gaps = 3/183 (1%)
 Frame = +3

Query: 3    LDLSGNPILSLPDCVRNISSLKNLYLNSCKSLKNVLGLPS-VENLRVGGCTPLQRITYKS 179
            L+LSGNP   LP+ + ++  L +L L+ C SLK++  LP+ + +L+   CT L+RIT   
Sbjct: 848  LNLSGNPFRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERIT-NL 906

Query: 180  ASFLPSL-LEHTYCSDLDEIQSVFKLEPIEEVDRELINSLGWFDVTTMGNLEVNLYNPCS 356
             + L SL LE   C  L E+Q +FKLEP+  ++ +++ S+G  ++ ++  +EV ++N  +
Sbjct: 907  PNLLKSLNLEIFGCDSLVEVQGLFKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALA 966

Query: 357  SIKKRP-IQGMYEFGIFNTFLPGREVPGWFSEKRMGSSISFTVPPLPDNLKIQGLNLCLV 533
              + R  IQ + E GIF+ FLPG  +P WF+++   SSISF V   P + KI+GL+LC +
Sbjct: 967  CTEMRTSIQVLQECGIFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGH-KIKGLSLCTL 1025

Query: 534  YAH 542
            Y +
Sbjct: 1026 YTY 1028


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/180 (38%), Positives = 107/180 (59%), Gaps = 2/180 (1%)
 Frame = +3

Query: 3    LDLSGNPILSLPDCVRNISSLKNLYLNSCKSLKNVLGLP-SVENLRVGGCTPLQRITYKS 179
            L+LSGN I  LP  +  ++ L++L L++C+SL+++  LP S+  L    CT L+RIT   
Sbjct: 837  LNLSGNSISCLPKTISGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLERITNLP 896

Query: 180  ASFLPSLLEHTYCSDLDEIQSVFKLEPIEEVDRELINSLGWFDVTTMGNLEVNLYNPCSS 359
                   L    C  L E+Q  FKLEPI   D+E+ N LG F++  +  ++V +++  + 
Sbjct: 897  NLMTSLRLNLAGCEQLVEVQGFFKLEPINNHDKEMANMLGLFNLGPVETIKVEMFSVMTM 956

Query: 360  IKK-RPIQGMYEFGIFNTFLPGREVPGWFSEKRMGSSISFTVPPLPDNLKIQGLNLCLVY 536
              +  P + ++E GI + FLPG EVPGW+S +  G  ISFT+PP     K+ GLN+C+VY
Sbjct: 957  TSRITPPKVLHECGICSIFLPGSEVPGWYSPQNEGPLISFTMPP-SHVRKVCGLNICIVY 1015


>ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|222842587|gb|EEE80134.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
 Frame = +3

Query: 3   LDLSGNPILSLPDCVRNISSLKNLYLNSCKSLKNVLGLPS-VENLRVGGCTPLQRITYKS 179
           L L  N   SLP  + ++  L  L+LN CKSL+ +  L S ++ L    C  L+ I  K+
Sbjct: 269 LKLCRNNFTSLPASIGSLPKLTRLWLNECKSLQCIPELQSSLQLLHAKDCLSLETINLKN 328

Query: 180 ASFLPSLLEHTYCSDLDEIQSVFKLEPIE-EVDRELINSLGWFDVTTMGNLEVNLYNPCS 356
             +    LE   C  L  I+  F LE +  E+  + + + G F   ++ ++ V++ N  +
Sbjct: 329 F-WGEGTLELDGCPKLKAIEGYFNLESLGIEIVEKYLGTCGLFTEDSLPSINVHVINNLT 387

Query: 357 SIKK-RPIQGMYEFGIFNTFLPGREVPGWFSEKRMGSSISFTVPPLPDNLKIQGLNLCLV 533
                 P+Q + E  I++ FLP  ++P WFS +  G S+S  VPPL    K  G ++  V
Sbjct: 388 RAATISPLQALSEKSIYSIFLPMSDIPTWFSHQNEGDSVSLQVPPLDHGCKFSGFSISAV 447

Query: 534 YA 539
           YA
Sbjct: 448 YA 449


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