BLASTX nr result

ID: Panax21_contig00035973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035973
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK60319.1|AF385728_1 AT3g47831/T23J7 [Arabidopsis thaliana] ...    97   1e-18
ref|XP_002877576.1| predicted protein [Arabidopsis lyrata subsp....    96   4e-18
ref|XP_003525120.1| PREDICTED: uncharacterized protein LOC100527...    87   1e-15
ref|XP_002318011.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
gb|ACU16813.1| unknown [Glycine max]                                   84   9e-15

>gb|AAK60319.1|AF385728_1 AT3g47831/T23J7 [Arabidopsis thaliana] gi|18700230|gb|AAL77725.1|
           AT3g47831/T23J7 [Arabidopsis thaliana]
           gi|26452241|dbj|BAC43208.1| unknown protein [Arabidopsis
           thaliana]
          Length = 57

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/55 (78%), Positives = 51/55 (92%)
 Frame = +2

Query: 65  MGITSKAGDWAFKAFTAGLGVATIYLTATFSFNVYRGLAWHNAQSKIERESTSDQ 229
           MGI ++AGDW+FKAFTAGLG+ATIYLTATFSFNVYRGL+WHNAQSK+E E + +Q
Sbjct: 1   MGIVTRAGDWSFKAFTAGLGLATIYLTATFSFNVYRGLSWHNAQSKLEIEESEEQ 55


>ref|XP_002877576.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323414|gb|EFH53835.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 57

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/55 (76%), Positives = 50/55 (90%)
 Frame = +2

Query: 65  MGITSKAGDWAFKAFTAGLGVATIYLTATFSFNVYRGLAWHNAQSKIERESTSDQ 229
           MGI ++AGDW+FKAFTAGLG+ATIYLT TFSFNVYRGL+WHNAQSK+E E + +Q
Sbjct: 1   MGIVTRAGDWSFKAFTAGLGLATIYLTGTFSFNVYRGLSWHNAQSKLEIEESEEQ 55


>ref|XP_003525120.1| PREDICTED: uncharacterized protein LOC100527671 [Glycine max]
          Length = 57

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/55 (70%), Positives = 47/55 (85%)
 Frame = +2

Query: 65  MGITSKAGDWAFKAFTAGLGVATIYLTATFSFNVYRGLAWHNAQSKIERESTSDQ 229
           MGI  K GD+AFKAFTA LGVATIYLTATFS NVYRGL+WHNAQ+K++++   +Q
Sbjct: 1   MGIAGKVGDYAFKAFTATLGVATIYLTATFSVNVYRGLSWHNAQTKLDKQDADEQ 55


>ref|XP_002318011.1| predicted protein [Populus trichocarpa] gi|222858684|gb|EEE96231.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = +2

Query: 65  MGITSKAGDWAFKAFTAGLGVATIYLTATFSFNVYRGLAWHNAQS 199
           MGI SKAGDW FKAFTAGLGV TIYL ATFS NVYRGL+WHNAQS
Sbjct: 1   MGIASKAGDWTFKAFTAGLGVTTIYLAATFSVNVYRGLSWHNAQS 45


>gb|ACU16813.1| unknown [Glycine max]
          Length = 57

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +2

Query: 65  MGITSKAGDWAFKAFTAGLGVATIYLTATFSFNVYRGLAWHNAQSKIERESTSDQ 229
           MGI  K  D+AFKAFTA LGVATIYLTATFS NVYRGL+WHNAQ+K++++   +Q
Sbjct: 1   MGIAGKVRDYAFKAFTATLGVATIYLTATFSVNVYRGLSWHNAQTKLDKQDADEQ 55


Top