BLASTX nr result
ID: Panax21_contig00035874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00035874
(603 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 252 3e-65
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 252 3e-65
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2... 238 6e-61
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 228 6e-58
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi... 227 1e-57
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 252 bits (644), Expect = 3e-65
Identities = 127/201 (63%), Positives = 151/201 (75%)
Frame = -1
Query: 603 AEDTFDCMLRSGIKPDHLAYSVMLDVQLRSIETKKAMMLYHQMVRDGFTPDVGLYEDMLR 424
AE+TFDCMLRSGIKPDHLAYSVMLD+ LR E+ KAM LY +MV F PD LYE MLR
Sbjct: 488 AEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLR 547
Query: 423 VLERENKEVGIQKVIKDMEELCNFNPQIISSILVKGECYNYAAKMLRLAIRQGYDLDHDN 244
VL +EN+E + KV+KDMEELC N Q+I SILVKGEC+++AA MLRLAI QG +LD +N
Sbjct: 548 VLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDREN 607
Query: 243 LLXXXXXXXXSGRHSEAKELLEFLKEHSPGSQQLVTEAMVVTLCKAHQLQAALDEYREGM 64
LL SGRH EA+ELL+FL+EHS GS QL+ EA+++ LCKAHQL AL EY +
Sbjct: 608 LLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKAR 667
Query: 63 KLGLFSRSFIMYDSLIKCCEE 1
GLF SF MY+SL+ CCEE
Sbjct: 668 DFGLFCGSFTMYESLLLCCEE 688
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 252 bits (644), Expect = 3e-65
Identities = 127/201 (63%), Positives = 151/201 (75%)
Frame = -1
Query: 603 AEDTFDCMLRSGIKPDHLAYSVMLDVQLRSIETKKAMMLYHQMVRDGFTPDVGLYEDMLR 424
AE+TFDCMLRSGIKPDHLAYSVMLD+ LR E+ KAM LY +MV F PD LYE MLR
Sbjct: 520 AEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLR 579
Query: 423 VLERENKEVGIQKVIKDMEELCNFNPQIISSILVKGECYNYAAKMLRLAIRQGYDLDHDN 244
VL +EN+E + KV+KDMEELC N Q+I SILVKGEC+++AA MLRLAI QG +LD +N
Sbjct: 580 VLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDREN 639
Query: 243 LLXXXXXXXXSGRHSEAKELLEFLKEHSPGSQQLVTEAMVVTLCKAHQLQAALDEYREGM 64
LL SGRH EA+ELL+FL+EHS GS QL+ EA+++ LCKAHQL AL EY +
Sbjct: 640 LLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKAR 699
Query: 63 KLGLFSRSFIMYDSLIKCCEE 1
GLF SF MY+SL+ CCEE
Sbjct: 700 DFGLFCGSFTMYESLLLCCEE 720
>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
predicted protein [Populus trichocarpa]
Length = 1480
Score = 238 bits (607), Expect = 6e-61
Identities = 124/201 (61%), Positives = 149/201 (74%)
Frame = -1
Query: 603 AEDTFDCMLRSGIKPDHLAYSVMLDVQLRSIETKKAMMLYHQMVRDGFTPDVGLYEDMLR 424
AE+TFDCMLRSGI+PDHLAYSVMLD+ LR E K+AM LY +M+ DG T D LYE MLR
Sbjct: 520 AEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLR 579
Query: 423 VLERENKEVGIQKVIKDMEELCNFNPQIISSILVKGECYNYAAKMLRLAIRQGYDLDHDN 244
L + NK I +VI+DMEE+C N Q ISSILVKGECY+ AAKMLR AI +++D +N
Sbjct: 580 TLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAISDHFEIDREN 639
Query: 243 LLXXXXXXXXSGRHSEAKELLEFLKEHSPGSQQLVTEAMVVTLCKAHQLQAALDEYREGM 64
LL SGRH+EA +LLEFLKEHSP S Q++TEA+VV LCKA QL AAL EY
Sbjct: 640 LLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNR 699
Query: 63 KLGLFSRSFIMYDSLIKCCEE 1
+LG F+ SF M++SLI+CC E
Sbjct: 700 ELG-FTGSFTMFESLIQCCLE 719
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 228 bits (581), Expect = 6e-58
Identities = 122/201 (60%), Positives = 143/201 (71%)
Frame = -1
Query: 603 AEDTFDCMLRSGIKPDHLAYSVMLDVQLRSIETKKAMMLYHQMVRDGFTPDVGLYEDMLR 424
AE+TFDCM RSGI+PD LAYSVMLDV LR E KAMMLY +MVRDG TPD +Y MLR
Sbjct: 476 AEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLR 535
Query: 423 VLERENKEVGIQKVIKDMEELCNFNPQIISSILVKGECYNYAAKMLRLAIRQGYDLDHDN 244
L RENK IQ++I+DMEE+C NPQ I+SILVKGECY AA MLRLAI ++D +N
Sbjct: 536 NLGRENKVEDIQRIIRDMEEVCGMNPQAIASILVKGECYEDAAGMLRLAISGSDEIDSEN 595
Query: 243 LLXXXXXXXXSGRHSEAKELLEFLKEHSPGSQQLVTEAMVVTLCKAHQLQAALDEYREGM 64
LL SGR +EA +LL+FLK H S QLV EA +VTLCKA QL AAL EY +
Sbjct: 596 LLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAALKEYNDTR 655
Query: 63 KLGLFSRSFIMYDSLIKCCEE 1
+ F+ S MY+SLI+CCEE
Sbjct: 656 EFDWFTGSCTMYESLIQCCEE 676
>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 227 bits (579), Expect = 1e-57
Identities = 117/199 (58%), Positives = 148/199 (74%)
Frame = -1
Query: 603 AEDTFDCMLRSGIKPDHLAYSVMLDVQLRSIETKKAMMLYHQMVRDGFTPDVGLYEDMLR 424
AE+TF+CM RSGIKPD LAYSVMLD LR E KKAM LYH+M+R+GFTPD GLYE M+
Sbjct: 515 AEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMH 574
Query: 423 VLERENKEVGIQKVIKDMEELCNFNPQIISSILVKGECYNYAAKMLRLAIRQGYDLDHDN 244
L REN + ++I+DMEEL NPQ+ISS+LVKG CY++AAKML++AI GY+LDH+
Sbjct: 575 ALVRENMWDVVDRIIRDMEELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYELDHEI 634
Query: 243 LLXXXXXXXXSGRHSEAKELLEFLKEHSPGSQQLVTEAMVVTLCKAHQLQAALDEYREGM 64
L S R+SEA ELLEF +EH+P Q++TEA+++ LCKA +L AAL+EYR
Sbjct: 635 FLSIMSSYSSSARYSEACELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKG 694
Query: 63 KLGLFSRSFIMYDSLIKCC 7
+LG F RS MY+SLI+ C
Sbjct: 695 ELGQF-RSCTMYESLIQEC 712