BLASTX nr result
ID: Panax21_contig00035862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00035862
(816 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi... 353 3e-95
ref|XP_002530010.1| pentatricopeptide repeat-containing protein,... 337 2e-90
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2... 334 2e-89
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar... 320 3e-85
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ... 314 2e-83
>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 353 bits (906), Expect = 3e-95
Identities = 162/271 (59%), Positives = 216/271 (79%)
Frame = +1
Query: 1 PKTKKDAVDWTTLMGCYARTGLAIEALRLFVDMRKHCLVPDDITMVCMFNACARLWDNAC 180
P + KD VDWTTLMGC+ R ++ EAL +FV+MR+ + PD++T+VC+F CARL D
Sbjct: 77 PHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVV 136
Query: 181 GIQGQVCMLKMGLSNSVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLIK 360
G QG CM+KMGL KACNA+MDMY K GL+ EAR+VF EM+ +SV+SWTV+L+G+I+
Sbjct: 137 GAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIR 196
Query: 361 WEGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLCS 540
EGV NG+++FDEMPERNEVAWT+MI G ++SG T+E+F + EM + + LNYV LCS
Sbjct: 197 SEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCS 256
Query: 541 LLSACTQSGDVMMGRWVHVYALKETKNKMDIMVATSLVDMYAKCGKIDIAYQVFKKIPRK 720
+L+AC+QSGD+MMGRWVH YALK + +++IMV T++VDMYAKCG+I IA++ FKK+P++
Sbjct: 257 ILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQR 316
Query: 721 NVVVWNAMLSALAMHGRGRVALEMFPEMVQE 813
NVV WNAMLS LAMHG GR AL++FP+M +E
Sbjct: 317 NVVSWNAMLSGLAMHGLGRAALDIFPQMFKE 347
Score = 73.6 bits (179), Expect = 5e-11
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 8/275 (2%)
Frame = +1
Query: 10 KKDAVDWTTLMGCYARTGLAIEALRLFVDMRKHCLVP-DDITMVCMFNACARLWDNACGI 186
+++ V WT ++ Y +GL E+ L +M + + +T+ + AC++ D G
Sbjct: 212 ERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGR 271
Query: 187 QGQVCMLKMGLSN-SVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLIKW 363
LK ++ A++DMY KCG + A K
Sbjct: 272 WVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFK----------------------- 308
Query: 364 EGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLCSL 543
F +MP+RN V+W M+ GL G + A +MF ++ + V S+
Sbjct: 309 --------FFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAK--PDDVTFTSV 358
Query: 544 LSACTQSGDV-----MMGRWVHVYALKETKNKMDIMVATSLVDMYAKCGKIDIAYQVFKK 708
LSAC+ SG V G VY + M VD+ + G+++ A + ++
Sbjct: 359 LSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACM-----VDLLGRAGRLEEAEILVRE 413
Query: 709 IP-RKNVVVWNAMLSALAMHGRGRVALEMFPEMVQ 810
+P R N VV ++L + ++HG+ ++ + E+VQ
Sbjct: 414 MPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQ 448
>ref|XP_002530010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530489|gb|EEF32372.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 487
Score = 337 bits (864), Expect = 2e-90
Identities = 156/272 (57%), Positives = 205/272 (75%), Gaps = 1/272 (0%)
Frame = +1
Query: 1 PKTKKDAVDWTTLMGCYAR-TGLAIEALRLFVDMRKHCLVPDDITMVCMFNACARLWDNA 177
P + KD DWT+L+ C A+ T A LF +MRK ++ DD+ VC+F+ CAR+ +
Sbjct: 88 PNSHKDTADWTSLLSCLAKHTSTPRNAFSLFEEMRKRGVILDDVAFVCVFSLCARVGNLE 147
Query: 178 CGIQGQVCMLKMGLSNSVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLI 357
G Q C++KMG +VK CNA+M++YVKC L+ EA+ VF EM ER ++SWT LLEG++
Sbjct: 148 MGRQAHGCVVKMGFGINVKVCNAVMNVYVKCRLMGEAKGVFSEMGERDIVSWTALLEGVV 207
Query: 358 KWEGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLC 537
WEGVENGK++FD+MPERNEV WT+MI G V SGF KE F L+EM R+ LNYV LC
Sbjct: 208 NWEGVENGKVVFDQMPERNEVGWTIMISGYVGSGFCKEGFLLLSEMVLGLRLELNYVTLC 267
Query: 538 SLLSACTQSGDVMMGRWVHVYALKETKNKMDIMVATSLVDMYAKCGKIDIAYQVFKKIPR 717
S+LSAC QSGDV+MGRWVHVYALK+ ++D+MV T+L+DMYAKCG+I +AY+VFK +PR
Sbjct: 268 SILSACAQSGDVVMGRWVHVYALKKMGREIDMMVGTALIDMYAKCGRIKMAYEVFKYLPR 327
Query: 718 KNVVVWNAMLSALAMHGRGRVALEMFPEMVQE 813
+NVV WNA+L LAMHG+GR+ L +FP+M+QE
Sbjct: 328 RNVVAWNAILGGLAMHGKGRIVLVIFPKMIQE 359
Score = 63.9 bits (154), Expect = 4e-08
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 8/228 (3%)
Frame = +1
Query: 142 MFNACARLWDNACGIQGQVCMLKMGLSNSVKA--CNALMDMYVKCGLVSEARKVFDEM-- 309
+ +CAR + G + +L G++ S A NAL+ +Y +CG+ A +FD++
Sbjct: 30 LLRSCARESSLSTGKKLHAILLTTGVATSPNAFLLNALLHLYSQCGITRYAHHLFDQIPN 89
Query: 310 RERSVISWTVLLEGLIKWEGV-ENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSL 486
+ WT LL L K N LF+EM +R +
Sbjct: 90 SHKDTADWTSLLSCLAKHTSTPRNAFSLFEEMRKRGVI---------------------- 127
Query: 487 TEMFSNSRIGLNYVVLCSLLSACTQSGDVMMGRWVHVYALKETKNKMDIMVATSLVDMYA 666
L+ V + S C + G++ MGR H +K +++ V +++++Y
Sbjct: 128 ----------LDDVAFVCVFSLCARVGNLEMGRQAHGCVVKMGFG-INVKVCNAVMNVYV 176
Query: 667 KCGKIDIAYQVFKKIPRKNVVVWNAMLSALAMH---GRGRVALEMFPE 801
KC + A VF ++ +++V W A+L + G+V + PE
Sbjct: 177 KCRLMGEAKGVFSEMGERDIVSWTALLEGVVNWEGVENGKVVFDQMPE 224
>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
predicted protein [Populus trichocarpa]
Length = 636
Score = 334 bits (856), Expect = 2e-89
Identities = 158/272 (58%), Positives = 203/272 (74%), Gaps = 1/272 (0%)
Frame = +1
Query: 1 PKTKKDAVDWTTLMGCYARTGLA-IEALRLFVDMRKHCLVPDDITMVCMFNACARLWDNA 177
P++ KD DWTTL+ + G E F +MRK +V DD+ M+ +F C R+ D
Sbjct: 80 PRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLG 139
Query: 178 CGIQGQVCMLKMGLSNSVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLI 357
G Q Q C++KMGL VK CNA+M+MYVKCGLV E R+VF EM ER+V+SW+ LLEG++
Sbjct: 140 MGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVV 199
Query: 358 KWEGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLC 537
KWEGVENG+++FDEMPERNEV WT+MI G V +GF++E F L EM R+GLN+V L
Sbjct: 200 KWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLS 259
Query: 538 SLLSACTQSGDVMMGRWVHVYALKETKNKMDIMVATSLVDMYAKCGKIDIAYQVFKKIPR 717
S+LSAC QSGDV+MGRWVHVYALK +M IMV T+LVDMYAKCG ID+A++VFK +P+
Sbjct: 260 SILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPK 319
Query: 718 KNVVVWNAMLSALAMHGRGRVALEMFPEMVQE 813
+NVV WNAML LAMHGRG+ L++FP+M++E
Sbjct: 320 RNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEE 351
Score = 75.5 bits (184), Expect = 1e-11
Identities = 69/270 (25%), Positives = 113/270 (41%), Gaps = 3/270 (1%)
Frame = +1
Query: 10 KKDAVDWTTLMGCYARTGLAIEALRLFVDM-RKHCLVPDDITMVCMFNACARLWDNACGI 186
+++ V WT ++ Y G + E L +M + L + +T+ + +ACA+ D G
Sbjct: 216 ERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGR 275
Query: 187 QGQVCMLK-MGLSNSVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLIKW 363
V LK MG + AL+DMY KCG + A KVF +
Sbjct: 276 WVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYL------------------ 317
Query: 364 EGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLCSL 543
P+RN VAW M+ GL G K +M ++ + + ++
Sbjct: 318 -------------PKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEAK--PDDLTFMAV 362
Query: 544 LSACTQSGDVMMGRWVHVYALKETKNKMDIMVATSLVDMYAKCGKIDIAYQVFKKIPR-K 720
LSAC+ SG V G E I +VD+ + G ++ A + KK+P
Sbjct: 363 LSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCP 422
Query: 721 NVVVWNAMLSALAMHGRGRVALEMFPEMVQ 810
N VV ++L + HG+ ++ + E++Q
Sbjct: 423 NEVVLGSLLGSCNAHGKLQLGERILQELIQ 452
Score = 65.1 bits (157), Expect = 2e-08
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 10/230 (4%)
Frame = +1
Query: 142 MFNACARLWDNACGIQGQVCMLKMGLSNSVK---ACNALMDMYVKCGLVSEARKVFDEM- 309
+ +CAR + G + +L GL++S NAL +Y CG+ S AR +F ++
Sbjct: 21 LLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIP 80
Query: 310 -RERSVISWTVLLEGLIKWEGVE--NGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFG 480
+ V WT LL L++ G + G F EM + V
Sbjct: 81 RSHKDVTDWTTLLTSLVQ-HGTKPSEGFFFFKEMRKEGVV-------------------- 119
Query: 481 SLTEMFSNSRIGLNYVVLCSLLSACTQSGDVMMGRWVHVYALKETKNKMDIMVATSLVDM 660
L+ V + S+ CT+ D+ MGR +K + + V ++++M
Sbjct: 120 ------------LDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLG-LGVKVCNAIMNM 166
Query: 661 YAKCGKIDIAYQVFKKIPRKNVVVWNAMLSALAMH---GRGRVALEMFPE 801
Y KCG ++ +VF ++ +NVV W+ +L + GRV + PE
Sbjct: 167 YVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPE 216
>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 320 bits (819), Expect = 3e-85
Identities = 148/278 (53%), Positives = 207/278 (74%), Gaps = 6/278 (2%)
Frame = +1
Query: 1 PKTKKDAVDWTTLMGCYARTGLAIEALRLFVDMRKHCLVPDDITMVCMFNACARLWDNAC 180
P ++KD VDWTTL+ ++R GL + +++LFV+MR+ + DD+++VC+F CA+L D
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 181 GIQGQVCMLKMGLSNSVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLIK 360
QG +KMG+ SVK CNALMDMY KCGLVSE +++F+E+ E+SV+SWTV+L+ ++K
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 361 WEGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLCS 540
WEG+E G+ +F EMPERN VAWTVM+ G + +GFT+E L EM GLN+V LCS
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 541 LLSACTQSGDVMMGRWVHVYALK------ETKNKMDIMVATSLVDMYAKCGKIDIAYQVF 702
+LSAC QSG++++GRWVHVYALK E + D+MV T+LVDMYAKCG ID + VF
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 703 KKIPRKNVVVWNAMLSALAMHGRGRVALEMFPEMVQEV 816
+ + ++NVV WNA+ S LAMHG+GR+ ++MFP+M++EV
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREV 347
Score = 59.7 bits (143), Expect = 8e-07
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 5/192 (2%)
Frame = +1
Query: 241 NALMDMYVKCGLVSEARKVFDE--MRERSVISWTVLLEGLIKWEGVENGKLLFDEMPERN 414
NAL Y G + A+K+FDE + E+ + WT LL ++ + N LF EM +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK- 105
Query: 415 EVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLCSLLSACTQSGDVMMGRWVH 594
R+ ++ V + L C + D+ + H
Sbjct: 106 -------------------------------RVEIDDVSVVCLFGVCAKLEDLGFAQQGH 134
Query: 595 VYALKETKNKMDIMVATSLVDMYAKCGKIDIAYQVFKKIPRKNVVVWNAMLSALAMH--- 765
A+K + V +L+DMY KCG + ++F+++ K+VV W +L +
Sbjct: 135 GVAVK-MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 766 GRGRVALEMFPE 801
RGR PE
Sbjct: 194 ERGREVFHEMPE 205
>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319557|gb|EFH49979.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 623
Score = 314 bits (804), Expect = 2e-83
Identities = 147/278 (52%), Positives = 203/278 (73%), Gaps = 6/278 (2%)
Frame = +1
Query: 1 PKTKKDAVDWTTLMGCYARTGLAIEALRLFVDMRKHCLVPDDITMVCMFNACARLWDNAC 180
P + KD VDWTTL+ ++R GL + +++LFV+MR+ + D +++VC+F CA+L D
Sbjct: 70 PLSDKDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRF 129
Query: 181 GIQGQVCMLKMGLSNSVKACNALMDMYVKCGLVSEARKVFDEMRERSVISWTVLLEGLIK 360
G QG +KMG SVK CNALMDMY KCG VSE +++F + E+SV+SWTV+L+ L+K
Sbjct: 130 GEQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVK 189
Query: 361 WEGVENGKLLFDEMPERNEVAWTVMIVGLVESGFTKEAFGSLTEMFSNSRIGLNYVVLCS 540
WEG++ G+ +FDEMPERN VAWT+M+ G + +GFT+E L EM GLN+V LCS
Sbjct: 190 WEGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 541 LLSACTQSGDVMMGRWVHVYALK------ETKNKMDIMVATSLVDMYAKCGKIDIAYQVF 702
+LSAC QSG++++GRWVHVYALK E + +MV T+LVDMYAKCG ID + +VF
Sbjct: 250 MLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVF 309
Query: 703 KKIPRKNVVVWNAMLSALAMHGRGRVALEMFPEMVQEV 816
+ + ++NVV WNA+ S LAMHG+GR+ ++MFPEMV+EV
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREV 347