BLASTX nr result

ID: Panax21_contig00035715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035715
         (1497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26400.3| unnamed protein product [Vitis vinifera]              170   8e-40
ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855...   166   1e-38
ref|XP_003619792.1| Plastid DNA-binding protein [Medicago trunca...   126   1e-26
ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-25
ref|XP_004152907.1| PREDICTED: uncharacterized protein LOC101209...   108   5e-21

>emb|CBI26400.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  170 bits (431), Expect = 8e-40
 Identities = 120/321 (37%), Positives = 179/321 (55%), Gaps = 12/321 (3%)
 Frame = +3

Query: 90   LSKPS-----SKRALTEISNLAWGSNTRSRGRSFAALVPS--VTPRKIRKWVSKDERQAM 248
            LS PS     S     EI N+   SN R  GRS+A  VPS  V  +K RK V KDER+ M
Sbjct: 12   LSAPSHPLQASSDVYAEIINVVHKSNIRRHGRSYAVSVPSYVVKAQKSRKRVPKDERKVM 71

Query: 249  VKEFINKHRSGNSGKFPTASYIKKEVGGSYYFVRKILQEVEYKSKLSSSNTGNESSNKKD 428
            V+ F+NK+R  N+GKFPT S  +K VGGSYY VR+++QE+E+K+K S  +  NE+  + +
Sbjct: 72   VESFVNKYRGMNAGKFPTVSEAQKHVGGSYYIVRELVQELEHKAKTSPLSRRNENLMENE 131

Query: 429  LPKENEGSNEFKENMSSYITVDAKIREDGQAVAINGMVTSDSSCMHSEVKKRTKVSVSFD 608
              KE +   E ++  +S  TVDA I +  Q V I+ +  SD+S  + E K    V    +
Sbjct: 132  PAKERKSLAEAEKVSTSRRTVDAVIEDYRQTVPISPLEASDASSKNLEAKGGKWV----E 187

Query: 609  KIKSVPDIDSSKSKAEDHQQSPEYSCPEKPEDVKEETCKPMLDIDG-----SKSKAEEHQ 773
            KI S  ++ +S    +   +   ++  EK E+ K +  +   D  G     S +   E +
Sbjct: 188  KILS-EEVTTSSGVVKGKTKDISHAHLEKLENGKIQDAQK--DRSGFVETPSVTLKGETE 244

Query: 774  PSSEYPSTKKLEDLKEETPYESLLDIDVSKSKAERHQSLLDLETFAREDLTEKQMEKIPK 953
             SS+      +   KEE   ESLL+ D +K + E++Q   +L+ F+R+   ++  E++PK
Sbjct: 245  GSSQPCLETIVGGKKEEVASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQNEEELPK 304

Query: 954  KSSIWVNLKYFAEGIINIWRK 1016
             S++W NLK FA GIIN+WRK
Sbjct: 305  GSTVWANLKSFAGGIINMWRK 325


>ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855088 [Vitis vinifera]
          Length = 381

 Score =  166 bits (421), Expect = 1e-38
 Identities = 120/333 (36%), Positives = 177/333 (53%), Gaps = 24/333 (7%)
 Frame = +3

Query: 90   LSKPS-----SKRALTEISNLAWGSNTRSRGRSFAALVPS--VTPRKIRKWVSKDERQAM 248
            LS PS     S     EI N+   SN R  GRS+A  VPS  V  +K RK V KDER+ M
Sbjct: 12   LSAPSHPLQASSDVYAEIINVVHKSNIRRHGRSYAVSVPSYVVKAQKSRKRVPKDERKVM 71

Query: 249  VKEFINKHRSGNSGKFPTASYIKKEVGGSYYFVRKILQEVEYKSKLSSSNTGNESSNKKD 428
            V+ F+NK+R  N+GKFPT S  +K VGGSYY VR+++QE+E+K+K S  +  NE+  + +
Sbjct: 72   VESFVNKYRGMNAGKFPTVSEAQKHVGGSYYIVRELVQELEHKAKTSPLSRRNENLMENE 131

Query: 429  LPKENEGSNEFKENMSSYITVDAKIREDGQAVAINGMVTSDSSCMHSEVKKRTKVSVSFD 608
              KE +   E ++  +S  TVDA I +  Q V I+ +  SD+S  + E K    V     
Sbjct: 132  PAKERKSLAEAEKVSTSRRTVDAVIEDYRQTVPISPLEASDASSKNLEAKGGKWVEKILS 191

Query: 609  KIKSVPDIDSS---------KSKAED----HQQSPEYSCPEKPEDVKEETC----KPMLD 737
            +  +  D  S          K K +D    H +  E     K +D +++       P + 
Sbjct: 192  EEVTTSDDHSDFVAMQSGVVKGKTKDISHAHLEKLENG---KIQDAQKDRSGFVETPSVT 248

Query: 738  IDGSKSKAEEHQPSSEYPSTKKLEDLKEETPYESLLDIDVSKSKAERHQSLLDLETFARE 917
            + G      E + SS+      +   KEE   ESLL+ D +K + E++Q   +L+ F+R+
Sbjct: 249  LKG------ETEGSSQPCLETIVGGKKEEVASESLLNFDGTKHEPEQNQGSPELDDFSRD 302

Query: 918  DLTEKQMEKIPKKSSIWVNLKYFAEGIINIWRK 1016
               ++  E++PK S++W NLK FA GIIN+WRK
Sbjct: 303  ISRKQNEEELPKGSTVWANLKSFAGGIINMWRK 335


>ref|XP_003619792.1| Plastid DNA-binding protein [Medicago truncatula]
            gi|355494807|gb|AES76010.1| Plastid DNA-binding protein
            [Medicago truncatula]
          Length = 378

 Score =  126 bits (317), Expect = 1e-26
 Identities = 110/350 (31%), Positives = 168/350 (48%), Gaps = 54/350 (15%)
 Frame = +3

Query: 129  SNLAWGSNTRSRGRSFAALVPSVT----PRKIRKWVSKDERQAMVKEFINKHRSGNSGKF 296
            S L W   + +   + AA VPS T    PRK    VSK ER+AMV+ F+NK++S N+GKF
Sbjct: 32   SKLQWRGWSHAAAAA-AACVPSETEDIRPRKNGSRVSKHERRAMVESFVNKYKSENAGKF 90

Query: 297  PTASYIKKEVGGSYYFVRKILQEVEYKSKLSSSNTGNESSNKKDLP----KENEGSNEFK 464
            P   Y +KEVGGSYY VR I+QE++YKSK+ S N+ +E   +K L     K  E  N   
Sbjct: 91   PAIKYTQKEVGGSYYTVRDIIQELKYKSKVKSLNSTDEILVEKVLDESKLKTAESVNVSS 150

Query: 465  ENMSSYITVDAKIREDGQAVAINGMVTSDSSCMHSEVK---------------KRTKVSV 599
            EN+ +    D  I++D Q+V ++     ++ C   E +               +    +V
Sbjct: 151  ENIET--AKDRPIQKDSQSVLLDDKEAVNTCCELEEKRGPQTFSQEGRLSYEVETISTTV 208

Query: 600  SFDKIKSVPDIDS-------SKSKAEDHQQSPE--YSCPE---KPE-----DVKEETCKP 728
            S DK +  P ++        S S+  +  +S E   SCP     PE     +  E+   P
Sbjct: 209  SIDKRREQPALEDMYGKASHSNSEVTNDVKSDETVSSCPSDYVAPEIHLLKEEIEQVSAP 268

Query: 729  MLDIDGSKSKAEEHQPSSEYPSTKKLEDLK---------EETPYESLLDIDVSKS----K 869
            +++  GS S +++H   S+    K    +K         E    +   D+ V  S    K
Sbjct: 269  IVEKSGS-SCSKDHIHDSKSVDIKNHPTIKIKSFDKAGLERKVQDGAQDLPVVDSPQHIK 327

Query: 870  AERHQSL-LDLETFAREDLTEKQMEKIPKKSSIWVNLKYFAEGIINIWRK 1016
             +  +SL LD       ++ E  +     KS++W NLK FA+G++N+WRK
Sbjct: 328  EQSQESLKLDESKIDGSNMRESSVAVASDKSTLWGNLKSFADGVLNMWRK 377


>ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|222873633|gb|EEF10764.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  123 bits (308), Expect = 1e-25
 Identities = 69/154 (44%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
 Frame = +3

Query: 123 EISNLAWGSNTRSRGRSFAALVPSVTPR--KIRKWVSKDERQAMVKEFINKHRSGNSGKF 296
           E++N   G+N + R RS+AA VPS  P+  K +K VSKD+R+AMV+ ++NK+R  ++GKF
Sbjct: 21  EVANAIHGANMQWRARSYAASVPSHMPQSHKAQKRVSKDDRRAMVESYVNKYRETHAGKF 80

Query: 297 PTASYIKKEVGGSYYFVRKILQEVEYKSKLSSSNTGNESSNKKDLPKENEGSNEFKENMS 476
           P+ S  +K+VGG+YYF+RKI+QE+EYKSK+SSSN+GN+   KK+LP  +E   + K   +
Sbjct: 81  PSISDARKQVGGNYYFIRKIVQELEYKSKISSSNSGNK---KKELPIVSEPLVKVKNMST 137

Query: 477 SYITVDAKIREDGQAVAINGMVTSDSSCMHSEVK 578
                D + + D +AV +N +   D+S  + EV+
Sbjct: 138 GGAMSDMRTQCDPRAVPLNDV--GDTSYRYLEVE 169


>ref|XP_004152907.1| PREDICTED: uncharacterized protein LOC101209410 [Cucumis sativus]
          Length = 306

 Score =  108 bits (269), Expect = 5e-21
 Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 7/305 (2%)
 Frame = +3

Query: 123  EISNLAWGSNTRSRGRSFAALVPSVT-----PRKIRKWVSKDERQAMVKEFINKHRSGNS 287
            E+ N    SNT  RGRS+   VPSV      P K RK VSK+ER+AMV+ F++K+++ N+
Sbjct: 35   ELDNFVPYSNTWWRGRSY---VPSVASDIPGPEKDRKRVSKEERRAMVESFVHKYKASNT 91

Query: 288  GKFPTASYIKKEVGGSYYFVRKILQEVEYKSKLSSSNTGNESSNKKDLPKENEGSNEFKE 467
            GKFP+A+   KEVGGSYY VRKILQE++ +S +SS    +++S ++   K N    E + 
Sbjct: 92   GKFPSAANTCKEVGGSYYVVRKILQELQSESSMSSLKGRSKNSFQETEIKSNGSLTEERP 151

Query: 468  NMSS-YITVDAKIREDGQAVAINGMVTSDSSCMHSEVKKRTKVSVSFDKIKSVPDIDSSK 644
            N    ++   +++++  +A  I   +++D    HS +  R+ +      ++   D+ SS 
Sbjct: 152  NAGRIHLEAASELQKSSRAEKI---LSADDDVSHSVLPVRSNL------LEDSEDVISSH 202

Query: 645  SKAEDHQQSPEYSCPEKPEDVKEETCKPMLDIDGSKSKAEEHQPSSEYPSTKKLEDLKEE 824
             K  D          +K  DV E                E H   +E  +   +  L+  
Sbjct: 203  KKPCD---------DDKKFDVSEH------------FSTESHALKNERDAVSDVH-LESR 240

Query: 825  TPYESLLDIDVSKSKAERHQSLLDLETFAREDLTEKQMEKIPKKSSIW-VNLKYFAEGII 1001
            +  E L   + S  K ++ QS   L     E+ T  + +    +S  W   +K   +GI+
Sbjct: 241  SSSEELKHEEGSYGKEQQVQSSPKLHRENVENRTVDEAQHTATESKPWGERIKSIVDGIV 300

Query: 1002 NIWRK 1016
            N+W K
Sbjct: 301  NMWWK 305


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