BLASTX nr result

ID: Panax21_contig00035707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035707
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814...   135   3e-30
ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag...   132   4e-29
emb|CBI31917.3| unnamed protein product [Vitis vinifera]              130   9e-29
ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212...   124   1e-26
ref|XP_001781419.1| predicted protein [Physcomitrella patens sub...    96   2e-18

>ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814892 [Glycine max]
          Length = 446

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/89 (70%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
 Frame = -1

Query: 510 CKSTCKVTGIKDLLACHYCFNKAFDKFYDMYTATWKXXXXXXXXXXICCEDHFEWHRMNC 331
           CKSTCKVT IKDLL CHYCF+KAF+KFYDMYTATWK          ICCEDHF WHRMNC
Sbjct: 358 CKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGLAIMWGSICCEDHFTWHRMNC 417

Query: 330 LNADVENSAYIVKKDAQHG---QLSDLIF 253
           LNA+VE SAYI+K D   G   QLSD IF
Sbjct: 418 LNANVEESAYILKPDGHKGKRTQLSDFIF 446


>ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 452

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/89 (68%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
 Frame = -1

Query: 510 CKSTCKVTGIKDLLACHYCFNKAFDKFYDMYTATWKXXXXXXXXXXICCEDHFEWHRMNC 331
           CKSTCKVT IKDLL CHYCF+KAF+KFYDMYTATWK          ICCEDHF WHRMNC
Sbjct: 364 CKSTCKVTDIKDLLVCHYCFDKAFEKFYDMYTATWKGAGFSIISGSICCEDHFTWHRMNC 423

Query: 330 LNADVENSAYIVKKDAQHG---QLSDLIF 253
           LNA  E SAYIV+++   G   QLSD IF
Sbjct: 424 LNAGAEESAYIVQRNGHKGKRTQLSDFIF 452


>emb|CBI31917.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/89 (67%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
 Frame = -1

Query: 510 CKSTCKVTGIKDLLACHYCFNKAFDKFYDMYTATWKXXXXXXXXXXICCEDHFEWHRMNC 331
           CKSTC+VT +KDLL CHYC +KAFDKFYDMYTATWK          ICCE+HF WHRMNC
Sbjct: 360 CKSTCEVTDLKDLLVCHYCLDKAFDKFYDMYTATWKGNGLSIIWGSICCEEHFAWHRMNC 419

Query: 330 LNADVENSAYIVKKDAQHG---QLSDLIF 253
           LNADVE+SAYI ++ AQ     QLSD IF
Sbjct: 420 LNADVEDSAYIFRRHAQKNNSIQLSDFIF 448


>ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus]
           gi|449513293|ref|XP_004164287.1| PREDICTED:
           uncharacterized protein LOC101227135 [Cucumis sativus]
          Length = 443

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 4/90 (4%)
 Frame = -1

Query: 510 CKSTCKVTGIKDLLACHYCFNKAFDKFYDMYTATWKXXXXXXXXXXICCEDHFEWHRMNC 331
           CKSTC+VT IKDLL CHYCF+KAFDKFYDMYTA+W           ICCEDHF WHRMNC
Sbjct: 355 CKSTCRVTQIKDLLVCHYCFDKAFDKFYDMYTASWNRAGLSIISGSICCEDHFAWHRMNC 414

Query: 330 LNADVENSAYIV----KKDAQHGQLSDLIF 253
            NADVE++AYI+    KKD +   +SD IF
Sbjct: 415 FNADVEDTAYIINRKPKKD-KFVSISDFIF 443


>ref|XP_001781419.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667156|gb|EDQ53793.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 489

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
 Frame = -1

Query: 510 CKSTCKVTGIKDLLACHYCFNKAFDKFYDMYTATWKXXXXXXXXXXICCEDHFEWHRMNC 331
           CK  C V  +++LLAC+ C ++AFDK+Y MY ATWK          ICC+ HF WHRMNC
Sbjct: 401 CKGPCPVVDMRELLACNSCLSEAFDKYYSMYNATWKGAGLKLIVNAICCDAHFNWHRMNC 460

Query: 330 LNADVENSAYIVKKDAQ--HG-QLSDLIF 253
            N DVE+SA +++KD    HG Q ++ +F
Sbjct: 461 GNVDVEDSASLLRKDGSDLHGSQFNEFLF 489


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