BLASTX nr result

ID: Panax21_contig00035639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035639
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518240.1| ATP binding protein, putative [Ricinus commu...   187   6e-46
ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...   174   5e-42
emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]   174   5e-42
emb|CBI20806.3| unnamed protein product [Vitis vinifera]              171   6e-41
emb|CBI24063.3| unnamed protein product [Vitis vinifera]              169   3e-40

>ref|XP_002518240.1| ATP binding protein, putative [Ricinus communis]
           gi|223542587|gb|EEF44126.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 802

 Score =  187 bits (476), Expect = 6e-46
 Identities = 102/149 (68%), Positives = 119/149 (79%), Gaps = 1/149 (0%)
 Frame = +3

Query: 18  VAIDKDKGSQGAMKWAVDSILSKGQTVLLIHIKLKSIGSATSAPSLSQ-RSSQISDVNDE 194
           VAIDKDK SQ A+KWA+D IL KGQTVLLIH+KLKSI S +SA SLS  R +QI+D N E
Sbjct: 23  VAIDKDKSSQSALKWAIDHILHKGQTVLLIHVKLKSI-SMSSAYSLSTPRMNQIADANGE 81

Query: 195 TGSLSGDVDPQTCRELFLPFRCFCTRKDIQCQDVVLEDTDVAKALIQYVTESAIEVLVLG 374
           +  +  D D  T +ELFLPFRCFCTRKDIQC+DVVLE+TD+AKAL++Y T +AIE LV+G
Sbjct: 82  SMLVCRDPDSLT-KELFLPFRCFCTRKDIQCKDVVLEETDIAKALVEYATRTAIETLVVG 140

Query: 375 AGSKSGLLRRFKAKDIPGSVLKGLSDFCT 461
           A +KSGL  RFKA D PGSVLKG  DFCT
Sbjct: 141 ASNKSGLF-RFKATDTPGSVLKGAPDFCT 168


>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score =  174 bits (442), Expect = 5e-42
 Identities = 91/148 (61%), Positives = 106/148 (71%)
 Frame = +3

Query: 18  VAIDKDKGSQGAMKWAVDSILSKGQTVLLIHIKLKSIGSATSAPSLSQRSSQISDVNDET 197
           VAIDKDKGSQ A+KWA+D+IL++GQTV+LIH+KLK            Q  S      DE 
Sbjct: 20  VAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK------------QSHSHSYPTGDEV 67

Query: 198 GSLSGDVDPQTCRELFLPFRCFCTRKDIQCQDVVLEDTDVAKALIQYVTESAIEVLVLGA 377
             L         +ELFLPFRCFCTRKDIQC+DV+LEDTDV KALI+YV+ SAIEVLV+GA
Sbjct: 68  AKLD-----HYTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGA 122

Query: 378 GSKSGLLRRFKAKDIPGSVLKGLSDFCT 461
            +K G LRRFKA DIPGS+ KG  DFCT
Sbjct: 123 PAKGGFLRRFKAIDIPGSITKGAPDFCT 150


>emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]
          Length = 768

 Score =  174 bits (442), Expect = 5e-42
 Identities = 91/148 (61%), Positives = 106/148 (71%)
 Frame = +3

Query: 18  VAIDKDKGSQGAMKWAVDSILSKGQTVLLIHIKLKSIGSATSAPSLSQRSSQISDVNDET 197
           VAIDKDKGSQ A+KWA+D+IL++GQTV+LIH+KLK            Q  S      DE 
Sbjct: 20  VAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLK------------QSHSHSYPTGDEV 67

Query: 198 GSLSGDVDPQTCRELFLPFRCFCTRKDIQCQDVVLEDTDVAKALIQYVTESAIEVLVLGA 377
             L         +ELFLPFRCFCTRKDIQC+DV+LEDTDV KALI+YV+ SAIEVLV+GA
Sbjct: 68  AKLD-----HYTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGA 122

Query: 378 GSKSGLLRRFKAKDIPGSVLKGLSDFCT 461
            +K G LRRFKA DIPGS+ KG  DFCT
Sbjct: 123 PAKGGFLRRFKAIDIPGSITKGAPDFCT 150


>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  171 bits (433), Expect = 6e-41
 Identities = 94/148 (63%), Positives = 112/148 (75%)
 Frame = +3

Query: 18  VAIDKDKGSQGAMKWAVDSILSKGQTVLLIHIKLKSIGSATSAPSLSQRSSQISDVNDET 197
           VAIDKDKGSQ A+KWA+D+IL++GQTV+LIH+KLK   S  S PS+S   S I+      
Sbjct: 424 VAIDKDKGSQSALKWAIDNILNRGQTVVLIHVKLKQSHSH-SYPSISFSPSFINS----- 477

Query: 198 GSLSGDVDPQTCRELFLPFRCFCTRKDIQCQDVVLEDTDVAKALIQYVTESAIEVLVLGA 377
            SL+        +ELFLPFRCFCTRKDIQC+DV+LEDTDV KALI+YV+ SAIEVLV+GA
Sbjct: 478 -SLTVAKLDHYTKELFLPFRCFCTRKDIQCKDVILEDTDVVKALIEYVSHSAIEVLVVGA 536

Query: 378 GSKSGLLRRFKAKDIPGSVLKGLSDFCT 461
            +K G L RFKA DIPGS+ KG  DFCT
Sbjct: 537 PAKGGFL-RFKAIDIPGSITKGAPDFCT 563


>emb|CBI24063.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/148 (58%), Positives = 105/148 (70%)
 Frame = +3

Query: 18  VAIDKDKGSQGAMKWAVDSILSKGQTVLLIHIKLKSIGSATSAPSLSQRSSQISDVNDET 197
           VAIDKDKGSQ A+KWAVD +LSKGQ+V L+HIK K    A+S P+       ISDVN++ 
Sbjct: 15  VAIDKDKGSQYALKWAVDHLLSKGQSVTLLHIKQK----ASSIPNPLGNQVAISDVNEDV 70

Query: 198 GSLSGDVDPQTCRELFLPFRCFCTRKDIQCQDVVLEDTDVAKALIQYVTESAIEVLVLGA 377
                       RELFLPFRCFC RKDIQC +V+LE TD+ KA+I +VT S+IE+LV+GA
Sbjct: 71  ARAYKQQLDNQARELFLPFRCFCMRKDIQCNEVILEGTDITKAIIDFVTASSIEILVVGA 130

Query: 378 GSKSGLLRRFKAKDIPGSVLKGLSDFCT 461
            S+SG +RRFK  D+P SVLK   DFCT
Sbjct: 131 PSRSGFIRRFKTTDVPSSVLKAAPDFCT 158


Top